Job Description P55138 Confidence 36.62% Date Thu Jan 5 12:06:08 GMT 2012 Rank 195 Aligned Residues 134 % Identity 13% Template c3bezC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals Resolution 2.76 Å

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		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.				.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.			.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.						.	.													.	.																										.	.	.	.	.	.	.
Query SS confidence																										.	.	.						.	.													.	.																										.	.	.	.	.	.	.
Query Sequence		A	L	T	L	K	N	N	Y	D	N	M	C	N	E	M	N	H	F	A	K	H	V	I	I	.	.	.	T	G	G	G	S	.	.	N	S	D	L	F	M	Q	I	F	A	D	V	.	.	F	N	L	P	A	R	R	N	A	I	N	G	C	A	S	L	G	A	A	I	N	T	A	V	G	.	.	.	.	.	.	.
Query Conservation																										.	.	.						.	.													.	.																										.	.	.	.	.	.	.
Alig confidence															.	.										.	.	.						.	.													.	.						.																				.	.	.	.	.	.	.
Template Conservation															.	.																																							.
Template Sequence		G	D	T	T	A	A	Q	I	R	D	A	R	L	.	.	D	P	K	V	K	A	I	V	L	R	V	N	S	P	G	G	S	V	T	A	S	E	V	I	R	A	E	L	A	A	A	R	A	A	G	K	P	V	.	V	V	S	X	G	G	X	A	A	S	G	G	Y	W	I	S	T	P	A	N	Y	I	V	A	N	P
Template Known Secondary structure															.	.		T	T													B																		T	T				.										T					T	T	T	T		S						T
Template Predicted Secondary structure															.	.																																							.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
											420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.								.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.															.					.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.															.					.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	L	G	L	Y	P	D	Y	A	T	A	V	D	N	M	.	V	R	V	K	.	.	.	.	.	.	.	D	I	F	I	P	I	E	S	N	A	K	R	Y	D	A	M	N	K	G	I	F	K	D	L	T	K	H	T	D	V	I	L	K	K	S	Y	E	V	M	H	G	E	L	G	N
Query Conservation		.	.	.	.	.	.	.	.	.															.					.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.															.					.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	L	T	G	S	I	G	I	F	G	V	I	T	T	V	E	N	S	L	D	S	I	G	V	H	T	D	G	V	S	T	S	P	L	A	D	V	S	I	T	R	A	L	P	P	E	A	Q	L	X	X	Q	L	S	I	E	N	G	Y	K	R	F	I	T	L	V	A	D	A	R	H	S	T	P	E	Q	I	D	K
Template Known Secondary structure		T																						T	T								S		G	G	G				T	T	S																														T
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
		483	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	S	I	Q	S	W	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	Q	G	H	V	W	T
Template Known Secondary structure		T		T	T
Template Predicted Secondary structure
Template SS confidence
		506	.	.	.	510	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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