Job Description P55138 Confidence 100.00% Date Thu Jan 5 12:06:08 GMT 2012 Rank 7 Aligned Residues 439 % Identity 22% Template c2nlxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:xylulose kinase; PDBTitle: crystal structure of the apo e. coli xylulose kinase Resolution 2.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	I	D	G	G	S	Q	S	T	K	V	V	M	Y	D	L	E	G	N	V	V	C	E	G	K	G	L	L	Q	P	M	H	T	P	D	A	D	T	A	E	H	P	D	D	D	L	W	A	S	L	C	F	A	G	H	D	L	M	S	Q	F	A	G	N	K	E	D	I	V	G	I	G	L	G	S	I	R	C
Query Conservation
Alig confidence																																.																																			.	.
Template Conservation																																.																																			.	.
Template Sequence		Y	I	G	I	D	L	G	T	S	G	V	K	V	I	L	L	N	E	Q	G	E	V	V	A	A	Q	T	E	K	L	.	T	V	S	R	P	H	P	L	W	S	E	Q	D	P	E	Q	W	W	Q	A	T	D	R	A	M	K	A	L	G	D	Q	H	S	L	.	.	Q	D	V	K	A	L	G	I	A	G	Q	M	H
Template Known Secondary structure									S	S									T	T	S											.			B			S	T	T																								S			.	.	T	T										S	S
Template Predicted Secondary structure																																.																																			.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																															.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		C	R	A	L	L	K	A	D	G	T	P	A	A	P	L	I	S	W	Q	D	A	R	V	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	E	H	T	N	P	D	V	A	.	.	.	.	Y	V	T	S	F	S	G	Y	L	T	H
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation
Template Sequence		G	A	T	L	L	D	A	Q	Q	R	V	L	R	P	A	I	L	W	N	D	G	R	C	A	Q	E	C	T	L	L	E	A	R	V	P	Q	S	R	V	I	T	G	N	L	M	M	P	G	F	T	A	P	K	L	L	W	V	Q	R	H	E	P	E	I	F	R	Q	I	D	K	V	L	L	P	K	D	Y	L	R	L
Template Known Secondary structure			B					T	T	S		B		S					T	T			T	T												T	T							S				T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	G	E	F	K	D	N	I	A	N	Y	F	G	Q	W	P	V	D	Y	K	S	W	A	W	S	E	D	A	A	V	M	D	K	F	N	I	P	R	H	M	L	F	D	V	Q	M	P	G	T	V	L	G	H	I	T	P	Q	A	A	L	A	T	H	F	P	A	G	L	P	V	V	C	T	T	S	D	K	P
Query Conservation
Alig confidence																															.	.																																					.
Template Conservation																															.	.																																					.
Template Sequence		R	M	T	G	E	F	A	S	D	M	S	D	A	A	G	T	M	W	L	D	V	A	K	R	D	W	S	D	V	.	.	M	L	Q	A	C	D	L	S	R	D	Q	M	P	A	L	Y	E	G	S	E	I	T	G	A	L	L	P	E	V	A	K	A	W	G	M	A	.	T	V	P	V	V	A	G	G	G	D	N	A
Template Known Secondary structure					S											T	T	T				T	T	T	T						.	.					T	T			G	G	G	S						T	T	S													T	T			.
Template Predicted Secondary structure																															.	.																																					.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	L	G	A	G	L	L	D	D	E	T	A	V	I	S	L	G	T	Y	I	A	L	M	M	N	G	K	A	L	P	K	D	P	V	A	Y	W	P	I	M	S	S	I	P	Q	T	L	L	Y	E	G	Y	G	I	R	K	G	M	W	T	V	S	W	L	R	D	M	L	G	E	S	L	I	Q	D	A	R	A
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		A	G	A	V	G	V	G	M	V	D	A	N	Q	A	M	L	S	L	G	T	S	G	V	Y	F	A	V	S	E	G	F	L	S	K	P	E	S	A	V	H	S	F	C	H	A	L	P	Q	R	W	H	L	M	S	V	M	L	S	A	A	S	C	L	D	W	A	A	K	L	T	G	L	.	.	.	.	.	.	.	.
Template Known Secondary structure								T			S	T	T							S	S	S								S	S					T	T	T	T							S	S	T	T											T	T	T									T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	L	S	P	E	D	L	L	N	K	K	A	S	C	V	P	P	G	C	N	G	L	M	T	V	L	D	W	L	T	N	P	W	E	P	Y	K	R	G	I	M	I	G	F	D	S	S	M	D	Y	A	W	I	Y	R	S	I	L	E	S	V	A	L	T	L	K	N	N	Y	D	N	M	C	N	E	M	N	H	F
Query Conservation
Alig confidence		.	.	.																											.	.	.	.	.																																										.
Template Conservation		.	.	.																											.	.	.	.	.																																										.
Template Sequence		.	.	.	S	N	V	P	A	L	I	A	A	A	Q	Q	A	D	E	S	A	E	P	V	W	F	L	P	Y	L	.	.	.	.	.	S	P	Q	A	K	G	V	F	F	G	L	T	H	Q	H	G	P	N	E	L	A	R	A	V	L	E	G	V	G	Y	A	L	A	D	G	M	D	V	V	H	A	.	C	G	I	K
Template Known Secondary structure		.	.	.		S									T	T			T	T	S										.	.	.	.	.													T	T																											T	.	T	T
Template Predicted Secondary structure		.	.	.																											.	.	.	.	.																																										.
Template SS confidence
					308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.						.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		A	K	H	V	I	I	T	G	G	G	S	N	S	D	L	F	M	Q	I	F	A	D	V	F	N	L	P	A	R	R	N	A	I	N	G	.	C	A	S	L	G	A	A	I	N	T	A	V	G	L	G	L	Y	P	D	Y	A	T	A	V	D	N	M	V	R	V	K	D	I	F	I	P	I	E	S	N	A	K	R	Y
Query Conservation																																					.
Alig confidence																																					.																												.
Template Conservation																																																																	.
Template Sequence		P	Q	S	V	T	L	I	G	G	G	A	R	S	E	Y	W	R	Q	M	L	A	D	I	S	G	Q	Q	L	D	Y	R	T	G	G	D	V	G	P	A	L	G	A	A	R	L	A	Q	I	A	A	N	P	E	K	S	L	I	E	L	L	P	Q	L	.	P	L	E	Q	S	H	L	P	D	A	Q	R	Y	A	A	Y
Template Known Secondary structure			S						S	G	G	G																					S		T	T	S																T	T	S						S				.
Template Predicted Secondary structure																																																																	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	M	N	K	G	I	F	K	D	L	T	K	H	T	D	V	I	L
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		Q	P	R	R	E	.	T	F	R	R	L	Y	Q	Q	L	L	P	L	M
Template Known Secondary structure							.										G	G	G	T
Template Predicted Secondary structure							.
Template SS confidence
		466	.	.	.	470		.	.	.	.	.	.	.	.	.	480	.	.	.