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Job DescriptionP55138
Confidence97.36%DateThu Jan 5 12:06:08 GMT 2012
Rank69Aligned Residues333
% Identity13%Templatec1qhaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein (hexokinase); PDBTitle: human hexokinase type i complexed with atp analogue amp-pnp
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  IIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRC
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Template Sequence  FLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIE. IMQGTGEELFDHIVSCISDFLDYMGIKGPRM. . . . . . . . . .
Template Known Secondary structure  SSS

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.TSBSTT

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   528.530.........540.........550.........560..... ....570.........580.........590......
 
   86...90.........100.........110.........120.........130.........140.........150..... ....160..
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Query Sequence  CRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSW. . . AWSEDAA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PLGFTFSFPCQQTSLDAGILITWTKGFK
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S
TT



TT

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   597..600.........610.........620....
 
   163......170.........180.........190.........200.........210.........220... ......230.........240
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Query Sequence  VMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDE. TAVISLGTYIALMMNGK.
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Template Sequence  ATDCVG. . . . . . . . . . . . HDVVTLLRDAIKRREEFD. . LDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEM
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BT
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   625....630 .........640........ .650.........660.........670.........680.........690
 
   241........250.... .....260.........270.........280.........290..
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Query Sequence  . . . ALPKDPVAYWPIMS. . . . . . . . . . . . . . . . . . . . . . . . . SIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQ
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Template Sequence  KNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVNEYSLNAGKQRYEK. MISGMYLGEIVRNILIDFTKKGFLFR
Template Known Secondary structure  GG
TTSS

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GGGTTSSSTTTTT

TSTTTTS
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   691........700.........710.........720.........730.........740... ......750.........760.........
 
   293......300.........310.........320.........330.........340.........350......... 360....
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Query Sequence  DLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKN. . . . . . . . NYDNM
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Template Sequence  GQISETLKTRGIFETKF. . . . LSQIESDRLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKI
Template Known Secondary structure  G


TTTTSTT
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   770.........780...... ...790.........800.........810.........820.........830.........840.....
 
   365....370.........380.. .......390..... ....400.........410.........420
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Query Sequence  CNEMNHFAKHVIITGGGS. . . NSDLFMQIFADVF. . . . . NLPARRNAINGCASLGAAINTAVGL
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Template Sequence  RENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGV
Template Known Secondary structure  TT
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TT
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   846...850.........860.........870.........880.........890.........900.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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