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Job DescriptionP55138
Confidence97.89%DateThu Jan 5 12:06:08 GMT 2012
Rank46Aligned Residues330
% Identity15%Templatec1ig8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:hexokinase pii; PDBTitle: crystal structure of yeast hexokinase pii with the correct2 amino acid sequence
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.. .......80.
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Query Sequence  IIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNK. EDIVGIGLG. . .
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Template Sequence  FLAIDLGGTNLRVVLVKLGGDRTFDTTQSK. . YRLPDAMRTTQNPDELWEFIADSLKAFIDEQFPQGISEPIPLGFTFSF
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TTGGG
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   82.......90.........100.........110. ........120.........130.........140.........150.........
 
   82.......90.........100.........110.........120.........130.........140.........150......
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Query Sequence  . . . . . SIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWA
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Template Sequence  PASQNKINEGILQRWTKGFDIPNI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
SBTT





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   160.........170.........180...
 
   157..160.........170.........180.........190.........200.........210.........220... ......230.....
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Query Sequence  WSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDE. TAVISLGTYIAL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . ENHDVVPMLQKQITKRNIP. . IEVVALINDTTGTLVASYYTDPETKMGVIFGTGVNG
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   184.....190.........200.. .......210.........220.........230........
 
   236...240.........250.........260... ......270.........280.........290.........300... ..
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Query Sequence  MMNGKALPKDPVAYWPIMSSIPQTLLYE. . GYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKK. . . . . . . . AS
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Template Sequence  AYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSF. DNEHVVLPRTKYDITIDEESPRPGQQTFEKMSSGYYLGEILRLA
Template Known Secondary structure  GGG
GGGTT
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   239240.........250.........260.........270... ......280.........290.........300.........310.......
 
   306...310.........320........ .330.........340.........350.........360
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Query Sequence  CVPPGCNGLMTVLDWLTNPWEPY. . . . . . . . . . . . . . . . . . . . . . . KRGIMIGFDSSMDYAWIYRSILESVALTLKNN. .
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Template Sequence  LMDMYKQGFIFKNQDLSKFDKPFVMDTSYPARIEEDPFENLEDTDDLFQNEFGINTTVQERKLIRRLSELIGARAARLSV
Template Known Secondary structure  TTSSSTT


TTTSSTTSS
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   318.320.........330.........340.........350.........360.........370.........380.........390.......
 
   361........370.........380.. .......390....... ..400.........410.........
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Query Sequence  . . YDNMCNEMNHFAKHVIITGGGS. NSDLFMQIFADVFNL. . . . . . . . . . . . PARRNAINGCASLGAAINTAVG
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Template Sequence  CGIAAICQKRGYKTGHIAADGSVYNRYPGFKEKAANALKDIYGWTQTSLDDYPIKIVPAEDGSGAGAAVIAALA
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SGGG
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   398.400.........410.........420.........430.........440.........450.........460.........470.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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