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Job DescriptionP55138
Confidence98.68%DateThu Jan 5 12:06:08 GMT 2012
Rank35Aligned Residues358
% Identity15%Templatec1e4gT_
PDB info PDB header:bacterial cell divisionChain: T: PDB Molecule:cell division protein ftsa; PDBTitle: ftsa (atp-bound form) from thermotoga maritima
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLG
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Template Sequence  KTVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGLDEGEI. KDAIAFKESVNTLLKELEEQLQKSLRSDFVISFS
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  SIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDA
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Template Sequence  SVSFEREDTVIERDFGEEKRSIT. . . . LDILSEXQSEALEKLKENGKTPLH. . . IFSKRYLLDDERIVFNPLDXKASKIA
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TT

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   162.......170.........180.........190.........200.........210......... 220.........230........
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Query Sequence  AVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGL. . . LDDETAVISLGTYIALMMN
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Template Sequence  IEYTSIVVPLKVYEXFYNFLQDTV. . . . . . . . . . . . . . . KSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIA
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   158.160.........170.........180. ........190.........200.........210.........220..
 
   239240.........250.........260.........270.........280.........290.........300.........310........
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Query Sequence  GKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVL
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Template Sequence  YK. . . . . . NGVPIKISYVPVG. . . . . . . . . . XKHVIKDVSAVLDTSFEE. . . . . . . . SERLIITHGNAVYNDLKEEEIQY
Template Known Secondary structure  ......TTS

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   223. .....230....... ..240.........250..... ....260.........270........
 
   319320.........330.........340.........350.........360.........370.........380.........390........
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Query Sequence  DWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLP
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Template Sequence  RGLDGNTIKTT. . . . . . . . TAKKLSVIIHARLREIXSKSKKFFREVE. . AKGIPGGVVLTGGGAKIPRINELATEVFKSP
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   279280......... 290.........300.........310....... ..320.........330.........340........
 
   399400.... .....410......
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Query Sequence  ARRNAI. . . . . . . . . . . . . . . . . . NGCASLGAAINT
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Template Sequence  VRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAV
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GGGTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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