Job Description P77414 Confidence 11.42% Date Thu Jan 5 12:29:00 GMT 2012 Rank 97 Aligned Residues 52 % Identity 19% Template c2funB_ PDB info PDB header:apoptosis/hydrolase Chain: B: PDB Molecule:caspase-8; PDBTitle: alternative p35-caspase-8 complex Resolution 3.00 Å

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.		.	.	.	10	.	.	.	.	.																							.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	N	N	P	L	.	I	S	I	Y	M	P	T	W	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	Q	L	A	I	R	A	I	K	S	V	L	R	Q	D	Y	S	N	W	E	M	I	I	V	D	D	C	S	T	S	W	E	Q	L	Q	Q	Y	V	T	A	L
Query Conservation								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		M	K	S	K	P	R	G	Y	C	L	I	I	N	N	H	N	F	A	K	A	R	E	K	V	P	K	L	H	S	I	R	D	R	N	G	T	H	L	D	A	G	A	L	T	T	T	F	E	E	L	.	.	.	.	.	.	H	F	E	I	K	P	H	H	D	C	T	V	E	Q	I	Y	E	I	L	K	I	Y	Q	L
Template Known Secondary structure					S	S																		S	S	G	G	G	G	S					T	T															T	.	.	.	.	.	.	T						B		S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		2228	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.							.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.
		58
Predicted Secondary structure
Query SS confidence
Query Sequence		N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		2302

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions