Job Description P77414 Confidence 99.97% Date Thu Jan 5 12:29:00 GMT 2012 Rank 4 Aligned Residues 207 % Identity 17% Template c2d7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+ Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.																			.	.															.
Query SS confidence															.																			.	.															.
Query Sequence		P	L	I	S	I	Y	M	P	T	W	N	R	Q	.	Q	L	A	I	R	A	I	K	S	V	L	R	Q	D	Y	S	N	W	.	.	E	M	I	I	V	D	D	C	S	T	S	W	E	Q	.	L	Q	Q	Y	V	T	A	L	N	D	P	R	I	T	Y	I	H	N	D	I	N	S	G	A	C	A	V	R	N	Q	A
Query Conservation															.																			.	.															.
Alig confidence															.																			.	.															.
Template Conservation
Template Sequence		P	N	T	S	I	I	I	P	F	H	N	E	G	W	S	S	L	L	R	T	V	H	S	V	L	N	R	S	P	P	E	L	V	A	E	I	V	L	V	D	D	F	S	D	R	E	H	L	K	K	P	L	E	D	Y	M	A	L	F	P	S	V	R	I	L	R	T	K	K	R	E	G	L	I	R	T	R	M	L	G
Template Known Secondary structure											S	S																	S		G	G	G										S				G	G	G	T								T	T	S	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		I	M	L	A	Q	G	E	Y	I	T	G	I	D	D	D	D	E	W	T	P	N	R	L	S	V	F	L	A	H	K	Q	Q	L	V	T	H	A	F	L	Y	A	N	D	Y	V	C	Q	G	E	V	Y	S	Q	P	A	S	L	P	L	Y	P	K	S	P	Y	S	R	R	L	F	Y	K	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	V	A	T	G	D	V	I	T	F	L	D	S	H	C	E	A	N	V	N	W	L	P	P	L	L	D	R	I	A	R	N	R	K	T	I	V	C	P	M	I	D	V	I	D	H	D	D	F	R	Y	E	T	Q	A	G	D	A	M	R	G	A	F	D	W	E	M	Y	Y	K	R	I	P	I	P	P	E	L	Q
Template Known Secondary structure							S	S							S	S					T	T		S											T	T												T	T	T							T	T	S	S							T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
													153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	R	N	I	I	G	N	Q	V	F	T	W	A	W	R	F	K	E	C	L	F	D	T	E	L	K	A	.	.	A	Q	D	Y	D	I	F	L	R	M	V	V	E	Y	G	E	P	W	K	V	E	E	A	T	Q	I	L	H	I	N	H	G	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		K	A	D	P	S	D	P	F	E	S	P	V	M	A	G	G	L	F	A	V	D	R	K	W	F	W	E	L	G	G	Y	D	P	G	L	E	I	W	G	G	E	Q	Y	E	I	S	F	K	V	W	M	C	G	G	R	M	E	D	I	P	C	S	R	V	G	H	I	Y	R	K	Y	V
Template Known Secondary structure			S	S	T	T	S					S	S			S	S	S											T	T	S	S		T	T			S	S	S	S												T	T																	S	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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