Job Description P77414 Confidence 18.07% Date Thu Jan 5 12:29:00 GMT 2012 Rank 80 Aligned Residues 53 % Identity 11% Template c1nmqB_ PDB info PDB header:apoptosis, hydrolase Chain: B: PDB Molecule:caspase-3; PDBTitle: extendend tethering: in situ assembly of inhibitors Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.		.	.	.	10	.	.	.	.																.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	N	N	P	L	.	I	S	I	Y	M	P	T	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	Q	Q	L	A	I	R	A	I	K	S	V	L	R	Q	D	Y	S	N	W	E	M	I	I	V	D	D	C	S	T	S	W	E	Q	L	Q	Q	Y	V	T	A	L	N	D
Query Conservation								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		M	D	Y	P	E	M	G	L	C	I	I	I	N	N	K	N	F	H	K	S	T	G	M	T	S	R	S	G	T	D	V	D	A	A	N	L	R	E	T	F	R	N	L	.	.	.	.	.	.	K	Y	E	V	R	N	K	N	D	L	T	R	E	E	I	V	E	L	M	R	D	V	S	K	E	D
Template Known Secondary structure				S	S															G	G	G						T	T															T	.	.	.	.	.	.	T								S															T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions