 |
Job Description | P0A6N4 | Confidence | 97.73% | Date | Thu Jan 5 11:03:35 GMT 2012 |
Rank | 22 | Aligned Residues | 56 |
% Identity | 16% | Template | d1bkba2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 1.75 |
|
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | V | D | M | N | L | T | Y | L | Y | N | D | G | E | F | W | H | F | M | N | N | E | T | F | E | Q | L | S | A | D | A | K | A | I | G | D | N | A | K | W | . |
L | L | D | Q | A | E | C | I | V | T | L | W | N | G | Q |
Query Conservation |   |
  |
|
|   |   |   |   |
|
|
|
|   |
|
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |   | . |
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|   |
|
|
|
|   |   |   |
|
|   |
Template Sequence |   |
I | I | E | K | F | T | A | Q | I | L | S | V | S | G | D | V | I | Q | L | X | D | X | R | D | Y | K | T | I | E | V | P | X | K | Y | V | E | E | E | A | K | G | R | L | A | P | G | A | E | V | E | V | W | Q | I | L | D | R |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  | G | G | G | B |
|  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |  |  | T | T |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|