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Job Description | P0A6N4 | Confidence | 23.58% | Date | Thu Jan 5 11:03:35 GMT 2012 |
Rank | 64 | Aligned Residues | 109 |
% Identity | 14% | Template | c3hslX_ |
PDB info |
PDB header:replication | Chain: X: PDB Molecule:orf59; |
PDBTitle: the crystal structure of pf-8, the dna polymerase accessory subunit2 from kaposi's sarcoma-associated herpesvirus
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Resolution | 2.80 Å |
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7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | D | F | R | A | G | L | K | I | M | L | D | G | E | P | Y | A | V | E | A | S | E | F | V | K | P | G | K | G | Q | A | F | A | R | V | K | L | R | R | L | L | T | G | T | R | V | E | K | T | F | K | S | T | D | S | A | E | G | A | D | V | V | D | M | N | L | T | Y | L | Y | N | D | G | E | F | W | H | F | M | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | A | T | K | T | G | V | V | Q | V | . |
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H | G | S | A | C | T | P | T | L | S | V | L | S | S | V | G | T | A | G | V | L | G | L | R | I | K | N | . |
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A | L | T | P | L | V | G | H | T | E | G | S | G | D | V | S | F | S | F | R | N | T | S | V | . |
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Template Known Secondary structure |   |
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| S | S | S |  |  |  |  |  |  |  | S | S | . | . | . | . | . |
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| S | S |  |  |  |  |  |  |  | S | B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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28 | . | 30 | . | . | . | . | . | . | . | |
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. | 90 | . | . | . | |
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87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | E | T | F | E | Q | L | S | A | D | A | K | A | I | G | D | N | A | K | W | L | L | D | Q | A | E | C | I | V | T | L | W | N | G | Q | P | I | S | V | T | P | P | N | F | V | E | L | E | I | V | D | T | D | P | G | L | K | G | D | T | A | G | T | G | G | K | P | A | T | L | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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H | T | R | E | L | F | G | A | N | V | L | . |
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D | A | G | I | A | F | Y | R | . |
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P | Q | F | V | R | T | T | I | S | Y | . |
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G | D | N | L | T | S | T | V | H | K | S | V | V | D |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . |  |  |  |  |  | T |
| T | T |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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94 | . | . | . | . | . | 100 | . | . | . | . | |
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. | . | . | . | . | 110 | . | . | |
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. | . | . | . | . | . | . | 120 | . | . | |
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. | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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