Job Description P0A9S5 Confidence 100.00% Date Thu Jan 5 11:11:14 GMT 2012 Rank 17 Aligned Residues 327 % Identity 19% Template d1sg6a_ SCOP info Dehydroquinate synthase-like Dehydroquinate synthase-like Dehydroquinate synthase, DHQS Resolution 1.70

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		8	.	10									.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.											.	.										.																													.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.											.	.										.																													.	.	.	.	.	.	.	.	.
Query Sequence		P	G	K	.	.	.	.	.	.	.	.	Y	I	Q	G	A	D	V	I	N	R	.	.	L	G	E	Y	L	K	P	L	A	.	E	R	W	L	V	V	G	D	K	F	V	L	G	F	A	Q	S	T	V	E	K	S	F	K	D	A	G	L	.	.	.	.	.	.	.	.	.	V	V	E	I	A	P	F	G	G	E
Query Conservation					.	.	.	.	.	.	.	.											.	.										.																													.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.											.	.										.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	K	I	S	I	L	G	R	E	S	I	I	A	D	F	G	L	W	R	N	Y	V	A	K	D	L	I	S	D	C	S	S	T	T	Y	V	L	V	T	D	T	N	I	G	S	I	Y	T	P	S	F	E	E	A	F	R	K	R	A	A	E	I	T	P	S	P	R	L	L	I	Y	N	R	P	P	G	E	V	S
Template Known Secondary structure								T	T								T	T					T									S			S																													S	S	S											S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.																				.	.															.	.
Query SS confidence																				.	.	.	.	.																				.	.															.	.
Query Sequence		C	S	Q	N	E	I	D	R	L	R	G	I	A	E	T	A	Q	C	.	.	.	.	.	G	A	I	L	G	I	G	G	G	K	T	L	D	T	A	K	A	L	A	.	.	H	F	M	G	V	P	V	A	I	A	P	T	I	A	.	.	S	T	D	A	P	C	S	A	L	S	V	I	Y	T	D	E	G	E	F	D
Query Conservation																				.	.	.	.	.																				.	.															.	.
Alig confidence																				.	.	.	.	.																				.	.															.	.
Template Conservation
Template Sequence		K	S	R	Q	T	K	A	D	I	E	D	W	M	L	S	Q	N	P	P	C	G	R	D	T	V	V	I	A	L	G	G	G	V	I	G	D	L	T	G	F	V	A	S	T	Y	M	R	G	V	R	Y	V	Q	V	P	T	T	L	L	A	M	V	D	S	S	I	G	G	K	T	A	I	D	T	P	L	G	K	N	L
Template Known Secondary structure		S	S													T	S	S	S				T	T								S														G	G	G										S						T	T	T	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	L	L	L	P	N	N	P	N	M	V	I	V	D	T	K	I	V	A	G	A	P	A	R	L	L	A	A	G	I	G	D	A	L	A	T	W	F	E	A	R	A	C	S	R	S	G	A	T	T	M	A	G	G	K	C	T	Q	A	A	L	A	L	A	E	L	C	Y	N	T	L	L	E	E	G	E	K	A	M
Query Conservation
Alig confidence								.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	A	I	W	Q	.	.	P	T	K	I	Y	I	D	L	E	F	L	E	T	L	P	V	R	E	F	I	N	G	M	A	E	V	I	K	T	A	A	I	S	S	E	E	E	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	E	E	N	A	E	T	I	L	K	A	V	R	R	E	V	T
Template Known Secondary structure								.	.		S						G	G	G	G	G	T	S																		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290
Predicted Secondary structure												.																				.	.	.																																										.	.	.	.
Query SS confidence												.																				.	.	.																																										.	.	.	.
Query Sequence		L	A	A	E	Q	H	V	V	T	P	.	A	L	E	R	V	I	E	A	N	T	Y	L	S	G	V	G	F	E	S	.	.	.	G	G	L	A	A	A	H	A	V	H	N	G	L	T	A	I	P	D	A	H	H	Y	Y	H	G	E	K	V	A	F	G	T	L	T	Q	L	V	L	E	N	A	.	.	.	.	P	V
Query Conservation												.																				.	.	.																																										.	.	.	.
Alig confidence												.																				.	.	.																					.																					.	.	.	.
Template Conservation																																																							.
Template Sequence		P	G	E	H	R	F	E	G	T	E	E	I	L	K	A	R	I	L	A	S	A	R	H	K	A	Y	V	V	S	A	G	L	R	N	L	L	N	W	G	H	S	I	G	H	A	I	E	A	I	L	T	P	Q	.	I	L	H	G	E	C	V	A	I	G	M	V	K	E	A	E	L	A	R	H	L	G	I	L	K	G
Template Known Secondary structure		T	T	S		T	T	G	G	G																							G	G	G	G	G	G	T	T												T	T	T	.	S																				T	T		S
Template Predicted Secondary structure																																																							.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.										.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		E	E	I	E	T	V	A	A	L	S	H	A	V	G	L	P	I	T	L	A	Q	L	D	I	K	E	D	V	P	A	.	.	.	K	M	R	I	V	A	E	A	A	C	A	E	G	.	.	.	.	.	.	.	.	.	E	T	I	H	N	M	P	G	G	A	T	P	D	Q	V	Y	A	A	L
Query Conservation																																.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	V	S	R	I	V	K	C	L	A	A	Y	G	L	P	T	S	L	K	D	A	R	I	R	K	L	T	A	G	K	H	C	S	V	D	Q	L	M	F	N	M	A	L	D	K	K	I	V	L	L	S	A	I	G	T	P	Y	E	T	R	A	S	V	V	A	N	E	D	I	R	V	V	L
Template Known Secondary structure														T	T				S	T	T								T	T	T														T										T	T			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions