Job Description P0A9S5 Confidence 20.56% Date Thu Jan 5 11:11:14 GMT 2012 Rank 407 Aligned Residues 103 % Identity 12% Template c3lkbB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:probable branched-chain amino acid abc PDBTitle: crystal structure of a branched chain amino acid abc2 transporter from thermus thermophilus with bound valine Resolution 2.40 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure															.	.															.
Query SS confidence															.	.															.
Query Sequence		V	I	N	R	L	G	E	Y	L	K	P	L	A	.	.	E	R	W	L	V	V	G	D	K	F	V	L	G	F	.	A	Q	S	T	V	E	K	S	F	K	D	A	G	L	V	V	E	I	A	P	F	G	G	E	C	S	Q	N	E	I	D	R	L	R	G	I	A	E	T	A	Q	C	G	A	I	L	G	I	G	G
Query Conservation															.	.															.
Alig confidence															.	.															.																	.
Template Conservation																																																.
Template Sequence		Q	V	V	A	L	L	E	Y	I	A	R	E	K	K	G	A	K	V	A	L	V	V	H	P	S	P	F	G	R	A	P	V	E	D	A	R	K	A	A	R	E	L	G	L	Q	I	.	V	D	V	Q	E	V	G	S	G	N	L	D	N	T	A	L	L	K	R	F	E	Q	A	G	V	E	Y	V	V	H	Q	N	V
Template Known Secondary structure														S	T	T									S	S					T	T												T				.								T	T														T	T								S
Template Predicted Secondary structure																																																.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		94	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		G	K	T	L	D	.	T	A	K	A	L	A	H	F	M	G	V	P	V	A	I	A	P	T	I	A	S	T
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		A	G	P	V	A	N	I	L	K	D	A	K	R	L	G	L	K	M	R	H	L	G	A	H	Y	T	G	G
Template Known Secondary structure															T	T									G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions