Job Description P0A9S5 Confidence 43.25% Date Thu Jan 5 11:11:14 GMT 2012 Rank 231 Aligned Residues 75 % Identity 12% Template c3kv1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri Resolution 1.70 Å

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		47	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																													.	.	.	.	.																.
Query SS confidence											.																													.	.	.	.	.																.
Query Sequence		T	V	E	K	S	F	K	D	A	.	G	L	V	V	E	I	A	P	F	G	G	E	C	S	Q	N	E	I	D	R	L	R	G	I	A	E	T	A	.	.	.	.	.	Q	C	G	A	I	L	G	I	G	G	G	K	T	L	D	.	T	A	K	A	L	A	H	F	M	G	V	P	V	A	I	A	P	T	I	A	S
Query Conservation											.																													.	.	.	.	.																.
Alig confidence											.																													.	.	.	.	.																.
Template Conservation
Template Sequence		Q	L	E	Q	K	L	V	E	K	F	N	L	K	R	A	L	I	S	L	D	Q	P	N	T	N	E	Q	R	K	Q	V	A	A	L	V	S	S	Y	L	N	N	N	L	Q	E	G	X	A	V	A	V	G	Q	G	Q	N	V	A	A	V	A	D	H	A	G	I	V	T	Q	R	N	A	R	F	V	S	A	I	G	G
Template Known Secondary structure												T		S									S	S																						T	T								S																							S	B		B
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		88	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions