Job Description P0A9S5 Confidence 41.63% Date Thu Jan 5 11:11:14 GMT 2012 Rank 240 Aligned Residues 57 % Identity 9% Template c3jpyA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glutamate [nmda] receptor subunit epsilon-2; PDBTitle: crystal structure of the zinc-bound amino terminal domain of the nmda2 receptor subunit nr2b Resolution 3.21 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		F	G	G	E	C	S	Q	N	E	I	D	R	L	R	G	I	A	E	T	A	Q	C	G	A	I	L	G	I	G	G	G	K	T	L	D	T	A	.	.	.	K	A	L	A	H	F	M	G	V	P	V	A	I	A	P	T	I	A	S	T
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.
Template Conservation
Template Sequence		M	N	E	T	D	P	K	S	I	I	T	R	I	C	D	L	M	S	D	R	K	I	Q	G	V	V	F	A	D	D	T	D	Q	E	A	I	A	Q	I	L	D	F	I	S	A	Q	T	L	T	P	I	L	G	I	H	G	G	S	S	M
Template Known Secondary structure			S			S															S			S								S			T													T	T								S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions