Job Description P0A9S5 Confidence 73.27% Date Thu Jan 5 11:11:14 GMT 2012 Rank 122 Aligned Residues 76 % Identity 7% Template c3h5lB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:putative branched-chain amino acid abc PDBTitle: crystal structure of a putative branched-chain amino acid2 abc transporter from silicibacter pomeroyi Resolution 1.70 Å

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		19	20	.	.	.	.	.	.	.	.									.		30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.		.															.
Query SS confidence												.	.	.	.	.	.	.	.		.															.
Query Sequence		N	R	L	G	E	Y	L	K	P	L	.	.	.	.	.	.	.	.	A	.	E	R	W	L	V	V	G	D	K	F	V	L	G	F	.	A	Q	S	T	V	E	K	S	F	K	D	A	G	L	V	V	E	I	A	P	F	G	G	E	C	S	Q	N	E	I	D	R	L	R	G	I	A	E	T	A	Q	C	G	A	I
Query Conservation												.	.	.	.	.	.	.	.		.															.
Alig confidence												.	.	.	.	.	.	.	.		.															.																	.
Template Conservation																																																					.
Template Sequence		G	G	F	L	K	F	L	K	D	I	E	D	N	G	E	F	S	R	P	N	N	K	I	A	I	I	T	G	P	G	I	Y	S	V	N	I	A	N	A	I	R	D	G	A	G	E	Y	G	Y	D	V	.	S	L	F	E	T	V	A	I	P	V	S	D	W	G	P	T	L	A	K	L	R	A	D	P	P	A	V	I
Template Known Secondary structure														T	T	S				S	S	S								S	S														G	G	G	G	T				.								S	S		S												S			S
Template Predicted Secondary structure																																																					.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		89	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	I	G	G	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	T	H	F	Y	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions