Job Description P0A9S5 Confidence 40.55% Date Thu Jan 5 11:11:14 GMT 2012 Rank 246 Aligned Residues 71 % Identity 24% Template c2vbgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp Resolution 1.80 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	N	R	L	G	E	Y	L	K	P	L	A	E	R	W	L	V	V	G	D	K	F	V	L	G	F	.	A	Q	S	T	V	E	K	S	F	K	D	A	G	L	V	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	P	F	G	G	E	C	S	Q	N	E	I	D	R	L	R	G	I
Query Conservation																													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.															.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation														.																																																																			.
Template Sequence		I	L	S	K	I	E	E	S	L	K	N	A	.	Q	K	P	V	V	I	A	G	H	E	V	I	S	F	G	L	E	K	T	V	T	Q	F	V	S	E	T	K	L	P	I	T	T	L	N	F	G	K	S	A	V	D	E	S	L	P	S	F	L	G	I	Y	N	G	K	L	S	E	I	S	L	K	N	F	V	E	.
Template Known Secondary structure														.	S	S												T	T													T							S	T	T	T	T	S	S		T	T	S	T	T							G	G	G	S										.
Template Predicted Secondary structure														.																																																																			.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	A	Q	C	G	A	I	L	G	I	G	G
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	S	A	D	F	I	L	M	L	G	V
Template Known Secondary structure		.	.	.	.			S						S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						272	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions