Job Description P0A9S5 Confidence 100.00% Date Thu Jan 5 11:11:14 GMT 2012 Rank 20 Aligned Residues 323 % Identity 14% Template c2gruB_ PDB info PDB header:lyase Chain: B: PDB Molecule:2-deoxy-scyllo-inosose synthase; PDBTitle: crystal structure of 2-deoxy-scyllo-inosose synthase2 complexed with carbaglucose-6-phosphate, nad+ and co2+ Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																						.																												.	.
Query SS confidence																						.																												.	.
Query Sequence		K	Y	I	Q	G	A	D	V	I	N	R	L	G	E	Y	L	K	P	L	A	.	E	R	W	L	V	V	G	D	K	F	V	L	G	F	A	Q	S	T	V	E	K	S	F	K	D	A	G	.	.	L	V	V	E	I	A	P	F	G	G	E	C	S	Q	N	E	I	D	R	L	R	G	I	A	E	T	A	Q	C	G
Query Conservation																						.																												.	.
Alig confidence																						.																												.	.
Template Conservation
Template Sequence		N	F	A	F	G	E	H	V	L	E	S	V	E	S	Y	I	P	R	D	E	F	D	Q	Y	I	M	I	S	D	S	G	V	P	D	S	I	V	H	Y	A	A	E	Y	F	G	K	L	A	P	V	H	I	L	R	F	Q	G	G	E	E	Y	K	T	L	S	T	V	T	N	L	Q	E	R	A	I	A	L	G	A	N
Template Known Secondary structure							T	T		G	G	G	G	G	G	T	S		S	S	S		S								T	T	S													T	T	T	S										S	G	G	G		B														T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
					87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																			.	.														.	.
Query SS confidence		.	.	.																			.	.														.	.
Query Sequence		.	.	.	A	I	L	G	I	G	G	G	K	T	L	D	T	A	K	A	L	A	.	.	H	F	M	G	V	P	V	A	I	A	P	T	I	.	.	A	S	T	D	A	P	C	S	A	L	S	V	I	Y	T	D	E	G	E	F	D	R	Y	L	L	L	P	N	N	P	N	M	V	I	V	D	T	K	I	V	A	G
Query Conservation		.	.	.																			.	.														.	.
Alig confidence		.	.	.																			.	.														.	.																												.	.
Template Conservation																																																																			.	.
Template Sequence		R	R	T	A	I	V	A	V	G	G	G	L	T	G	N	V	A	G	V	A	A	G	M	M	F	R	G	I	A	L	I	H	V	P	T	T	F	L	A	A	S	D	S	V	L	S	I	K	Q	A	V	N	L	T	S	G	K	N	L	V	G	F	Y	Y	P	.	.	P	R	F	V	F	A	D	T	R	I	L	S	E
Template Known Secondary structure		T	T								S														G	G	G										S						T	T	T	S	S								T	T											.	.		S											T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	R	L	L	A	A	G	I	G	D	A	L	A	T	W	F	E	A	R	A	C	S	R	S	G	A	T	T	M	A	G	G	K	C	T	Q	A	A	L	A	L	A	E	L	C	Y	N	T	L	L	E	E	G	E	K	A	M	L	A	A	E	Q	H	V	V	T	P	A	L	E	R	V	I	E	A	N	T	Y
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	P	R	Q	V	K	A	G	M	C	E	L	V	K	N	M	L	I	L	E	N	D	N	K	E	F	T	E	D	D	L	N	S	A	N	V	Y	S	P	K	Q	L	E	T	F	I	N	F	C	I	S	A	K	M	S	V	L	S	E	D	I	Y	E	K	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																			S			S			S	S		G	G	G			S	S																								T	T		T	T	S	S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		L	S	G	V	G	F	E	S	G	G	L	A	A	A	H	A	V	H	N	G	L	T	A	I	P	D	A	H	H	Y	Y	H	G	E	K	V	A	F	G	T	L	T	Q	L	V	L	E	N	A	.	.	.	.	P	V	E	E	I	E	T	V	A	A	L	S	H	A	V	G	L	P	I	T	L	A	Q	L	D	I	K
Query Conservation																																																			.	.	.	.
Alig confidence		.	.	.	.	.	.	.																				.																							.	.	.	.
Template Conservation		.	.	.	.	.	.	.																				.
Template Sequence		.	.	.	.	.	.	.	G	L	I	F	E	Y	G	H	T	I	G	H	A	I	E	L	A	E	Q	.	G	G	I	T	H	G	E	A	I	A	V	G	M	I	Y	A	A	K	I	A	N	R	M	N	L	M	P	E	H	D	V	S	A	H	Y	W	L	L	N	K	I	G	A	L	Q	D	I	P	L	K	S	D	P
Template Known Secondary structure		.	.	.	.	.	.	.	G	G	G	G	G	T	T											T	T	.	T	S	S																				T	T	S	S															T	T	T	T	S	S					S
Template Predicted Secondary structure		.	.	.	.	.	.	.																				.
Template SS confidence
									239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		316	.	.	.	320	.	.	.	.											.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	V	P	A	K	M	R	I	.	.	.	.	.	.	.	.	.	.	V	A	E	A	A	C	A	E	G	E	T	I	H	N	M	P	G	G	A	T	P	D	Q	V	Y	A	A	L	L	V	A
Query Conservation											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	I	F	H	Y	L	I	H	D	N	D	E	D	N	L	G	M	I	L	L	S	G	V	G	K	P	A	M	Y	N	Q	T	L	L	T	P	V	R	K	T	L	I	K	E	V	I	R	E	G
Template Known Secondary structure															S										T	T					B	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions