Job Description P0A9S5 Confidence 54.45% Date Thu Jan 5 11:11:14 GMT 2012 Rank 171 Aligned Residues 96 % Identity 11% Template c2fqxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:membrane lipoprotein tmpc; PDBTitle: pnra from treponema pallidum complexed with guanosine Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		R	W	L	V	V	G	D	.	.	.	.	.	.	K	F	V	L	G	F	A	Q	S	T	V	E	K	S	F	K	D	A	G	L	V	V	E	I	A	P	F	G	G	E	C	S	Q	N	E	I	D	R	L	R	G	I	A	E	T	A	Q	C	G	A	I	L	G	I	G	G	G	K	T	L	D	T	A	K	A	L	A
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																											.	.	.
Template Conservation																																									.	.	.
Template Sequence		V	V	G	M	V	T	D	S	G	D	I	D	D	K	S	F	N	Q	Q	V	W	E	G	I	S	R	F	A	Q	E	N	N	A	K	C	K	Y	V	T	.	.	.	A	S	T	D	A	E	Y	V	P	S	L	S	A	F	A	D	E	N	M	G	L	V	V	A	C	G	S	F	L	V	E	A	V	I	E	T	S	A
Template Known Secondary structure								S	S	S		T	T	S	S	S																T	T								.	.	.			S	G	G	G											T	T		S						S	T	T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	M	G	V	P	V	A	I	A	P	T	I	A	S	T	D	A	P	C	S	A	L	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	P	K	Q	K	F	L	V	I	D	A	V	V	Q	D	R	D	N	V	V	S	A	V	F
Template Known Secondary structure				T	T	S						S	S				S		T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions