Job Description P0A9S5 Confidence 100.00% Date Thu Jan 5 11:11:14 GMT 2012 Rank 18 Aligned Residues 295 % Identity 19% Template c1xahA_ PDB info PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: crystal structure of staphlyococcus aureus 3-dehydroquinate2 synthase (dhqs) in complex with zn2+ and nad+ Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		M	D	R	I	I	Q	S	.	.	.	P	G	K	Y	I	Q	G	A	D	V	I	N	R	L	G	E	Y	L	K	P	L	A	E	R	W	L	V	V	G	D	K	F	V	L	G	F	A	Q	S	T	V	E	K	S	F	K	D	A	G	L	V	V	E	I	A	P	F	G	G	E	C	S	Q	N	E	I	D	R	L	R
Query Conservation									.	.	.
Alig confidence									.	.	.																							.																			.	.	.	.	.
Template Conservation																																		.																			.	.	.	.	.
Template Sequence		M	K	L	Q	T	T	Y	P	S	N	N	Y	P	I	Y	V	E	H	G	A	I	K	Y	I	G	T	Y	L	N	Q	F	D	.	Q	S	F	L	L	I	D	E	Y	V	N	Q	Y	F	A	N	K	F	.	.	.	.	.	D	N	V	H	K	V	I	I	P	A	G	E	K	T	K	T	F	E	Q	Y	Q	E	T	L
Template Known Secondary structure									S	S									T	T	G	G	G							T	T		S	.																			.	.	.	.	.										S	G	G	G	G		S
Template Predicted Secondary structure																																		.																			.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		78	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure											.	.	.																			.	.														.
Query SS confidence											.	.	.																			.	.														.
Query Sequence		G	I	A	E	T	A	Q	C	G	.	.	.	A	I	L	G	I	G	G	G	K	T	L	D	T	A	K	A	L	A	.	.	H	F	M	G	V	P	V	A	I	A	P	T	I	.	A	S	T	D	A	P	C	S	A	L	S	V	I	Y	T	D	E	G	E	F	D	R	Y	L	L	L	P	N	N	P	N	M	V	I
Query Conservation											.	.	.																			.	.														.
Alig confidence											.	.	.																			.	.														.																												.	.
Template Conservation																																																																											.	.
Template Sequence		E	Y	I	L	S	H	H	V	T	R	N	T	A	I	I	A	V	G	G	G	A	T	G	D	F	A	G	F	V	A	A	T	L	L	R	G	V	H	F	I	Q	V	P	T	T	I	L	A	H	D	S	S	V	G	G	K	V	G	I	N	S	K	Q	G	K	N	L	I	G	A	F	Y	R	.	.	P	T	A	V	I
Template Known Secondary structure						T	T				T	T								S														G	G	G										S	T	T					T	S	S								S	S	S	T	T								.	.		S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		V	D	T	K	I	V	A	G	A	P	A	R	L	L	A	A	G	I	G	D	A	L	A	T	W	F	.	.	.	E	A	R	A	C	S	R	S	G	A	T	T	M	A	G	G	K	C	T	Q	A	A	L	A	L	A	E	L	C	Y	N	T	L	L	E	E	G	E	K	A	M	L	A	A	E	Q	H	V	V	T	P
Query Conservation																												.	.	.
Alig confidence																												.	.	.														.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		Y	D	L	D	F	L	K	T	L	P	F	K	Q	I	L	S	G	Y	A	E	V	Y	K	H	A	L	L	N	G	E	S	A	T	Q	D	I	E	Q	H	F	K	D	.	.	.	.	.	.	.	.	.	.	R	E	I	L	Q	S	L	N	G	M	D	K	Y	I	A	K	G	I	E	T	K	L	D	I	V	V	A	.
Template Known Secondary structure				G	G	G	G	G	G																																S		S	.	.	.	.	.	.	.	.	.	.							T	T	T																			.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200											.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		A	L	E	R	V	I	E	A	N	T	Y	L	S	G	V	G	F	E	S	G	G	L	A	A	A	H	A	V	H	N	G	L	T	A	I	P	D	A	H	H	Y	Y	H	G	E	K	V	A	F	G	T	L	T	Q	L	V	L	E	N	A	.	.	.	P	V	E	E	I	E	T	V	A	A	L	S	H	A	V	G	L
Query Conservation																																																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																											.	.	.																					.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	D	E	K	E	Q	G	V	R	K	F	L	N	L	G	H	T	F	G	H	A	V	E	Y	Y	H	K	.	.	.	I	P	H	G	H	A	V	M	V	G	I	I	Y	Q	F	I	V	A	N	A	L	F	D	S	K	H	D	I	S	H	Y	I	Q	Y	L	I	Q	L	G	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	S	T	T	S	S	S	G	G	G	G	G	G	T	T	T												.	.	.																						T																	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
													228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		306	.										.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		P	I	.	.	.	.	.	.	.	.	.	T	L	A	Q	L	D	I	K	E	D	V	P	A	K	M	R	I	V	A	E	A
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	D	G	V	Q	M	V	L	M	R	Q	F	G	D	I	V	V	Q	H	V	D	Q	L	T	L	Q	H	A	C	E	Q
Template Known Secondary structure						B								T	T							B
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions