Job Description P0A9S5 Confidence 54.09% Date Thu Jan 5 11:11:14 GMT 2012 Rank 172 Aligned Residues 73 % Identity 19% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		R	W	L	V	V	G	D	K	F	V	L	G	F	A	Q	S	T	V	E	K	S	F	K	D	A	G	L	V	V	E	I	A	P	F	G	G	E	C	S	Q	N	E	I	D	R	L	R	G	I	A	E	T	A	Q	C	G	A	I	L	G	.	.	.	I	G	G	G	K	T	L	D	T	A	K	A	L	A	H	F	M
Query Conservation																																																														.	.	.
Alig confidence															.	.	.															.	.	.	.	.	.	.	.																							.	.	.
Template Conservation															.	.	.															.	.	.	.	.	.	.	.
Template Sequence		N	V	L	V	I	E	D	D	K	V	F	R	G	.	.	.	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	.	.	.	.	.	.	.	.	S	A	E	R	G	K	E	A	Y	K	L	L	S	E	K	H	F	N	V	V	L	L	D	L	L	L	P	D	V	N	G	L	E	I	L	K	W	I	K	E	R	S
Template Known Secondary structure															.	.	.										T					.	.	.	.	.	.	.	.			S	S											S			S						S	B		S	S	S	B
Template Predicted Secondary structure															.	.	.															.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.									.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
			108	.	110	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	V	P	V	A	I	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		P	E	T	E	V	I	V	I
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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