Return to main results Retrieve Phyre Job Id

Job DescriptionP39321
Confidence12.28%DateThu Jan 5 11:59:20 GMT 2012
Rank9Aligned Residues30
% Identity17%Templated2olua1
SCOP infoLysozyme-like Lysozyme-like PBP transglycosylase domain-like
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1138.1140.... .....1150.........1160.......
Predicted Secondary structure 

...................









Query SS confidence 






. . . . . . . . . . . . . . . . . . .






















Query Sequence  MSQQAAL. . . . . . . . . . . . . . . . . . . SYLLRGQGLESDQSDSAAMTSML
Query Conservation 
   


...................
 

 
                 
Alig confidence 






...................






















Template Conservation   

 



 


 
  
    

 


  



    

  


 

 
Template Sequence  YSKDDIFQVYLNKIYYSDGVTGIKAAAKYYFNKDLKDLNLAEEAYLAGL
Template Known Secondary structure  S

B
STTSS

GGG

G
Template Predicted Secondary structure 
















Template SS confidence 
















































   182.......190.........200.........210.........220.........230
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions