Job Description P39321 Confidence 3.62% Date Thu Jan 5 11:59:20 GMT 2012 Rank 75 Aligned Residues 48 % Identity 23% Template c3m8lA_ PDB info PDB header:virus Chain: A: PDB Molecule:capsid protein; PDBTitle: crystal structure analysis of the feline calicivirus capsid protein Resolution 3.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1073	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.				.	.	.	.	.	.	.	1100	.		.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.
Predicted Secondary structure																						.	.	.										.
Query SS confidence																						.	.	.										.
Query Sequence		G	R	F	H	A	Y	G	Q	D	L	I	V	R	K	G	E	L	L	F	S	.	.	.	G	P	P	D	Q	P	Y	L	N	.	I	E	A	I	R	N	P	D	A	T	E	D	D	V	I	A	G	V	R	V	T	G	L	A
Query Conservation																						.	.	.										.
Alig confidence											.	.	.									.	.	.										.						.	.
Template Conservation											.	.	.																											.	.
Template Sequence		T	S	V	N	W	S	T	S	E	.	.	.	T	Q	G	K	I	L	F	K	Q	S	L	G	P	L	L	N	P	Y	L	T	H	L	A	K	L	Y	.	.	V	A	W	S	G	S	I	E	V	R	F	S	I	S	G	S	G
Template Known Secondary structure								S		S	.	.	.		T	T									S	T	T	S	S								T	T	B	.	.	S				S												T
Template Predicted Secondary structure											.	.	.																											.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions