Job Description P39321 Confidence 7.92% Date Thu Jan 5 11:59:20 GMT 2012 Rank 19 Aligned Residues 126 % Identity 14% Template c3lycL_ PDB info PDB header:cell adhesion Chain: L: PDB Molecule:putative pectinase; PDBTitle: crystal structure of putative pectinase (yp_001304412.1) from2 parabacteroides distasonis atcc 8503 at 2.30 a resolution Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		856	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.											.	.	.	890	.	.	.	.	.	.	.	.	.	900							.	.	.	.	.	.	.	.	.	910	.	.	.		.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.														.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.														.
Query Sequence		F	T	R	G	E	K	A	A	G	M	V	S	A	N	L	R	L	G	G	D	V	Q	S	P	Q	L	F	G	Q	L	Q	.	.	.	.	.	.	.	.	.	.	V	T	G	V	D	I	D	G	N	F	M	P	F	D	.	.	.	.	.	.	M	Q	P	S	Q	L	A	V	N	F	N	G	M	.	R	S	T	L	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.														.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.														.
Template Conservation
Template Sequence		S	R	N	L	K	K	L	A	A	A	G	S	T	H	V	N	I	N	S	P	L	Q	A	E	E	F	E	A	G	L	A	G	S	G	I	I	Q	F	H	D	T	A	S	F	T	N	L	K	I	E	I	A	G	S	G	D	F	V	G	H	K	V	Y	C	E	E	L	N	G	D	X	A	G	S	N	T	I	V	L	G
Template Known Secondary structure			S									S	S							S													S	S							S													S	S																			S	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		919	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.		950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.			.	.	970	.	.	.	.	.	.	.	.	.	980	.
Predicted Secondary structure																																	.																			.	.
Query SS confidence																																	.																			.	.
Query Sequence		G	T	V	R	T	Q	Q	G	E	I	Y	L	N	G	D	A	D	W	S	Q	I	E	N	W	R	A	R	V	T	A	K	.	G	S	K	V	R	I	T	V	P	P	M	V	R	M	D	V	S	P	.	.	D	V	V	F	E	A	T	P	N	L	F	T	L	D
Query Conservation																																	.																			.	.
Alig confidence																																	.																			.	.
Template Conservation
Template Sequence		G	T	V	G	I	A	E	F	S	I	A	G	S	G	T	V	R	A	F	D	C	T	X	D	E	L	E	C	K	I	A	G	S	G	D	I	E	A	F	V	V	N	K	I	K	A	E	I	A	G	S	G	S	V	K	Y	K	G	D	P	Q	D	I	Q	K	K
Template Known Secondary structure													S	S																			S	S																	S	S							S			S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions