Job Description P39321 Confidence 5.39% Date Thu Jan 5 11:59:20 GMT 2012 Rank 42 Aligned Residues 49 % Identity 27% Template c1ihmC_ PDB info PDB header:virus Chain: C: PDB Molecule:capsid protein; PDBTitle: crystal structure analysis of norwalk virus capsid Resolution 3.40 Å

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		1075	.	.	.	.	1080	.	.	.	.	.	.					.	.	.	1090	.	.				.	.	.	.	.	.	.	1100		.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.
Predicted Secondary structure														.	.	.	.							.	.	.									.
Query SS confidence														.	.	.	.							.	.	.									.
Query Sequence		F	H	A	Y	G	Q	D	L	I	V	R	K	.	.	.	.	G	E	L	L	F	S	.	.	.	G	P	P	D	Q	P	Y	L	.	N	I	E	A	I	R	N	P	D	A	T	E	D	D	V	I	A	G	V	R	V	T	G	L	A
Query Conservation														.	.	.	.							.	.	.									.
Alig confidence														.	.	.	.							.	.	.									.											.	.
Template Conservation																																														.	.
Template Sequence		V	Q	A	P	Q	G	E	F	T	I	S	P	N	N	T	P	G	D	V	L	F	D	L	S	L	G	P	H	L	N	P	F	L	L	H	L	S	Q	M	Y	N	G	W	V	.	.	G	N	M	R	V	R	I	M	L	A	G	N	A
Template Known Secondary structure													T	T			T	T									S	G	G	G	S								T	T	B	S				.	.													T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		3061	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.	3080	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.			.	.	.	.	.	3110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions