Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB18
Confidence31.23%DateThu Jan 5 11:14:23 GMT 2012
Rank36Aligned Residues45
% Identity20%Templatec3cdlA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator aefr; PDBTitle: crystal structure of a tetr family transcriptional regulator from2 pseudomonas syringae pv. tomato str. dc3000
Resolution2.36 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940..... ....50........ .60.........70.........80.........90
Predicted Secondary structure 

.
.














Query SS confidence 






.












.































Query Sequence  LSPEHWE. VVRFVRDFYLEFN. TSPAIRMLVKAMANKFGEEKGNSRYLYRLFPK
Query Conservation 


 

 .

 


  
 
  .  
  
 
 
             
 

 


 
Alig confidence 






.












.












.......











Template Conservation   

  
  

 

  
    
    

  

  

.......

  


 

 
Template Sequence  LTDQKRESIVQAAIAEFGDRGFEITSXDRIAARAE. . . . . . . VSKRTVYNHFPS
Template Known Secondary structure 


TTT

TT.......S
TTSSS
Template Predicted Secondary structure 






.......





Template SS confidence 





















































   3......10.........20.........30....... ..40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions