Job Description P75960 Confidence 100.00% Date Thu Jan 5 12:16:29 GMT 2012 Rank 3 Aligned Residues 227 % Identity 28% Template c3jwpA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein sir2 homologue; PDBTitle: crystal structure of plasmodium falciparum sir2a (pf13_0152) in2 complex with amp Resolution 2.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		E	K	P	R	V	L	V	L	T	G	A	G	I	S	A	E	S	G	I	R	T	F	R	A	.	A	D	G	L	W	E	E	H	R	V	E	D	V	A	T	P	E	G	F	D	R	D	P	E	L	V	Q	A	F	Y	N	A	R	R	R	Q	L	Q	Q	P	E	I	Q	P	N	A	A	H	L	A	L	A	K	L	Q
Query Conservation																										.
Alig confidence																										.																																						.	.	.
Template Conservation																																																																.	.	.
Template Sequence		K	C	K	H	V	V	A	L	T	G	S	G	T	S	A	E	S	N	I	P	S	F	R	G	S	S	N	S	I	W	S	K	Y	D	P	R	I	Y	G	T	I	W	G	F	W	K	Y	P	E	K	I	W	E	V	I	R	D	I	S	S	D	Y	.	.	.	E	I	E	I	N	N	G	H	V	A	L	S	T	L	E
Template Known Secondary structure				S								G	G	G	T	G	G	G	T			B	S	S	S	S	S	S	B	G	G	G	T	S						S	B								T	T													S	.	.	.
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		D	A	L	G	D	R	F	L	L	V	T	Q	N	I	D	N	L	H	E	R	A	G	N	T	N	V	I	H	M	H	G	E	L	L	K	V	R	C	S	Q	S	G	Q	V	L	D	W	T	G	D	.	.	.	.	.	.	V	T	P	E	D	K	C	H	C	C	Q	F	P	A	P	L	R	P	H	V	V	W	F	G
Query Conservation																																																				.	.	.	.	.	.
Alig confidence				.																																																.	.	.	.	.	.
Template Conservation				.
Template Sequence		S	L	.	G	Y	L	K	S	V	V	T	Q	N	V	D	G	L	H	E	A	S	G	N	T	K	V	I	S	L	H	G	N	V	F	E	A	V	C	C	T	C	N	K	I	V	K	L	N	K	I	X	L	Q	K	T	S	H	F	X	H	Q	L	P	P	E	C	P	C	G	G	I	F	K	P	N	I	I	L	F	G
Template Known Secondary structure			T	.	T										S	S							T		S					T	T									T	T	T												S	T	T	S	S	T	T	T	S	S	S		B		T	T	S		B								B	T
Template Predicted Secondary structure				.
Template SS confidence
		96	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		155	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure							.	.																																																						.
Query SS confidence							.	.																																																						.
Query Sequence		E	M	P	L	G	.	.	M	D	E	I	Y	M	A	L	S	M	A	D	I	F	I	A	I	G	T	S	G	H	V	Y	P	A	A	G	F	V	H	E	A	K	L	H	G	A	H	T	V	E	L	N	L	E	P	S	Q	V	G	N	E	.	F	A	E	K	Y	Y	G	P	A	S	Q	V	V	P	E	F	V	E	K
Query Conservation							.	.																																																						.
Alig confidence							.	.																																																						.															.
Template Conservation																																																																													.
Template Sequence		E	V	V	S	S	D	L	L	K	E	A	E	E	E	I	A	K	C	D	L	L	L	V	I	G	T	S	S	T	V	S	T	A	T	N	L	C	H	F	A	C	K	K	K	K	K	I	V	E	I	N	I	S	K	T	Y	I	T	N	K	X	S	D	Y	H	V	C	A	K	F	S	E	L	T	K	.	V	A	N	I
Template Known Secondary structure																		T		S						S			S	S	S	S												T	T								S	S			S	S	T	T	T	T		S							G	G	G	G			.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.
		232	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		254	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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