Job Description P75960 Confidence 100.00% Date Thu Jan 5 12:16:29 GMT 2012 Rank 5 Aligned Residues 224 % Identity 28% Template c2hjhB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:nad-dependent histone deacetylase sir2; PDBTitle: crystal structure of the sir2 deacetylase Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.
Query Sequence		E	K	P	R	V	L	V	L	T	G	A	G	I	S	A	E	S	G	I	R	T	F	R	A	A	D	G	L	W	E	E	H	.	.	.	.	.	.	R	V	E	D	V	A	T	P	E	G	F	D	R	D	P	E	L	V	Q	A	F	Y	N	A	R	R	R	Q	L	Q	Q	P	E	I	Q	P	N	A	A	H	L	A
Query Conservation																																		.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.																							.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		T	A	R	K	I	L	V	L	T	G	A	G	V	S	T	S	L	G	I	P	D	F	R	S	S	E	G	F	Y	S	K	I	K	H	L	G	L	D	D	P	Q	D	V	F	N	Y	N	I	F	X	H	D	P	S	V	F	Y	N	I	A	.	.	.	.	N	X	V	L	P	P	E	K	I	Y	S	P	L	H	S	F
Template Known Secondary structure				S	S							G	G	G	G	G	G	G	T				S	S	S	T	T	S									T		S		G	G	G	G	G	B								T							G	.	.	.	.	G	G	T					S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																								130
Predicted Secondary structure																													.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	K	L	Q	D	A	L	G	D	R	F	L	L	V	T	Q	N	I	D	N	L	H	E	R	A	G	.	.	N	T	N	V	I	H	M	H	G	E	L	L	K	V	R	C	S	Q	S	G	Q	V	L	D	W	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation																													.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																				.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		I	K	X	L	Q	X	K	.	G	K	L	L	R	N	Y	T	Q	N	I	D	N	L	E	S	Y	A	G	I	S	T	D	K	L	V	Q	C	H	G	S	F	A	T	A	T	C	V	T	C	H	W	N	L	P	G	E	R	I	F	N	K	I	R	N	L	E	L	P	L	C	P	Y	C	Y	K	K	R	R	E	Y	F
Template Known Secondary structure								T	.	T											S							T			G	G	G				T	T									T	T	T						G	G	G	G						T	T				B		T	T	T
Template Predicted Secondary structure									.
Template SS confidence
		329	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		V	T	P	E	D	K	C	H	C	C	Q	F	P	A	P	L	R	P	H	V	V	W	F	G	E	M	P	L	G	.	.	M	D	E	I	Y	M	A	L	S	M	A	D	I	F	I	A	I	G	T	S	G	H	V	Y	P	A	A	G	F	V	H	E	A	K	L	H	G	A	H	T	V	E	L	N	L	E	P	S	Q
Query Conservation																															.	.
Alig confidence																															.	.																																			.
Template Conservation																																																																			.
Template Sequence		S	X	S	E	R	P	P	Y	I	L	N	S	Y	G	V	L	K	P	D	I	T	F	F	G	E	A	L	P	N	K	F	H	K	S	I	R	E	D	I	L	E	C	D	L	L	I	C	I	G	T	S	L	K	V	A	P	V	S	E	I	V	N	X	V	P	.	S	H	V	P	Q	V	L	I	N	R	D	P	V	K
Template Known Secondary structure			G	G	G	S	T	T	T	S		T	T	T	T	B								B	T	S	B																							S							T	G	G	G					S		.	T	T	S							S	S			T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	N	E	F	A	E	K	Y	Y	G	P	A	S	Q	V	V	P	E	F	V	E	K	L
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		H	A	E	.	F	D	L	S	L	L	G	Y	C	D	D	I	A	A	X	V	A	Q	K	C
Template Known Secondary structure		T			.		S					S													T
Template Predicted Secondary structure					.
Template SS confidence
		502	.	.		.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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