 |
Job Description | P75960 | Confidence | 94.59% | Date | Thu Jan 5 12:16:29 GMT 2012 |
Rank | 53 | Aligned Residues | 72 |
% Identity | 17% | Template | c1y5iA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:respiratory nitrate reductase 1 alpha chain; |
PDBTitle: the crystal structure of the narghi mutant nari-k86a
|
Resolution | 1.90 Å |
|
 |
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | M | A | L | S | M | A | D | I | F | I | A | I | G | T | S | G | H | V | Y | . |
. |
P | A | A | G | F | V | H | E | A | K | L | H | G | A | H | T | V | E | L | N | L | E | P | S | Q | V | G | N | E | F | A | E | K | Y | Y | . |
. |
. |
G | P | A | S | Q | V | V | P | E | F | V | E | K | L | L | K | G |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   | . | . |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|
|   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|
|   |
|
Template Sequence |   |
S | A | D | W | Y | N | S | S | Y | I | I | A | W | G | S | N | V | P | Q | T | R | T | P | D | A | H | F | F | T | E | V | R | Y | K | G | T | K | T | V | A | V | T | P | D | Y | A | E | I | A | K | L | C | D | L | W | L | A | P | K | Q | G | T | D | A | A | M | A | L | A | M | G | H | V | M | L | R | E |
Template Known Secondary structure |   |
 |  |  |  | T | T |
| S |  |  |  |  |  | S |
|
|  |  |  |  | S | G | G | G |  |  |  |  |  |  |  | G | G | G | T |
|  |  |  |  |  |
| S | S |
|
|  |  |  |  | T | S | S |  |  |  |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|