|   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | A | I | K | R | G | T | V | I | D | H | I | P | A | Q | I | G | F | K | L | L | S | L | F | K | L | T | E | T | D | Q | R | I | T | I | G | L | N | L | P | S | G | E | M | G | R | K | D | L | I | K | I | E | N | T | F | L | S | E | D | Q | V | D | Q | L | A | L | Y | A | P | Q | A | T | V | N | R | I | D | N |
Query Conservation |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
Template Sequence |   |
V | E | A | I | K | R | G | T | V | I | D | H | I | P | A | Q | I | G | F | K | L | L | S | L | F | K | L | T | E | T | D | Q | R | I | T | I | G | L | N | L | P | S | G | E | M | G | R | K | D | L | I | K | I | E | N | T | F | L | S | E | D | Q | V | D | Q | L | A | L | Y | A | P | Q | A | T | V | N | R | I | D | N |
Template Known Secondary structure |   |
|
|
|
| S | S |  |  |  |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  | T | T | T | T | S | S | S | S |
|  |  |  |  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  |  | T |
|
|
|
|  |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | E | V | V | G | K | S | R | P | S | L | P | E | R | I | D | N | V | L | V | C | P | N | S | N | C | I | S | H | A | E | P | V | S | S | S | F | A | V | R | K | R | A | N | D | I | A | L | K | C | K | Y | C | E | K | E | F | S | H | N | V | V | L | A | N |
Query Conservation |   |
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |
|
|
|   |
|   |
|
|   |
|
|
|
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |   |   |   |
|
|   |   |
|   |
|
|
|   |
|   |
|
|   |
|
|
|
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
Y | E | V | V | G | K | S | R | P | S | L | P | E | R | I | D | N | V | L | V | C | P | N | S | N | C | I | S | H | A | E | P | V | S | S | S | F | A | V | R | K | R | A | N | D | I | A | L | K | C | K | Y | C | E | K | E | F | S | H | N | V | V | L | A | N |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |
|
|
|
|
| S |  |  |  | S | S | B |
|
| S |
| T | T |
| T | T | T | T | S | S |
|
|
|  |  |  |  |  |  |
| S | S | S |  |  |  |  |  | T | T | T |
|
|  |  |  | T | T | T |
|
| B |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |