Job Description P33940 Confidence 99.78% Date Thu Jan 5 11:52:57 GMT 2012 Rank 33 Aligned Residues 255 % Identity 16% Template d1ju2a1 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain Resolution 1.47

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.															.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	E	Q	E	T	D	V	L	L	I	G	G	G	I	M	S	A	T	L	G	T	Y	L	R	E	L	E	P	E	W	S	M	T	M	V	E	R	L	E	G	V	A	Q	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	G	W	N	N	A	G	T	G	H	S	A	L	M	E	L	N	Y	T
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.
Template Sequence		E	L	E	G	S	Y	D	Y	V	I	V	G	G	G	T	S	G	C	P	L	A	A	T	L	S	E	.	.	.	K	Y	K	V	L	V	L	E	R	G	S	L	P	T	A	Y	P	N	V	L	T	A	D	G	F	V	Y	N	L	Q	Q	E	D	D	G	K	T	P	V	E	R	F	V	S	E	D	G	I	D	N	V
Template Known Secondary structure			S												S	T	T									T	T	.	.	.	T	S							S	S	B		G	G	G	S	G	G	G	G	B	G	G	G							S				S	S	S	S							T	T	S
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	N	A	D	G	S	I	S	I	E	K	A	V	A	I	N	E	A	F	Q	I	S	R	Q	F	W	A	H	Q	V	E	R	G	V	L	R	T	P	R	S	F	I	N	T	V	P	H	M	S	F	V	W	G	E	D	N	V	N	F	L	R	A	R	Y	A	A	L	Q	Q	S	S	L	F	R	G	M	R	Y	S
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	R	V	L	G	G	T	S	I	I	N	A	G	V	Y	A	R	A	N	T	S	I	Y	S	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	D	W	D	M	D	L	V	N	Q	T	Y	E	W	V	E	D	T	I	V	Y	K	P	N	S	Q	S	W	Q	S
Template Known Secondary structure					B	T	T	G	G	G	G	T	S						B			T	T	S	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																				B
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		E	D	H	A	Q	I	K	E	W	A	P	L	V	M	E	G	R	D	P	Q	Q	K	V	A	A	T	R	T	E	I	G	T	D	V	N	Y	G	E	I	T	R	Q	L	I	A	S	L	Q	K	K	S	N	F	S	L	Q	L	S	S	E	V	R	A	L	K	R	N	D	D	.	.	.	N	T	W	T	V	T	V	A
Query Conservation																																																																							.	.	.
Alig confidence																																																																							.	.	.
Template Conservation
Template Sequence		V	T	K	T	A	F	L	E	A	G	V	H	P	N	H	G	F	S	L	D	H	E	E	G	T	R	I	T	G	S	T	F	D	N	K	G	T	R	H	A	A	D	E	L	L	N	K	G	N	S	N	N	L	R	V	G	V	H	A	S	V	E	K	I	I	F	S	N	A	P	G	L	T	A	T	G	V	I	Y	R
Template Known Secondary structure										T	T										B			S	S							S	B		T	T	S	B	B			G	G	G	G	G	G	G	S		T	T	T						S											S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		250	.		.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.											.										.
Query SS confidence				.											.										.
Query Sequence		D	L	.	K	N	G	T	A	Q	N	I	R	A	.	K	F	V	F	I	G	A	G	G	.	A	A	L	K	L	L	Q	E	S	G	I	P	E	A	K	D	Y	A	G	F	P	V	G	G	Q	F	L	V	S	E	N	P	D	V	V	N	H	H	L
Query Conservation				.											.										.
Alig confidence				.											.										.																			.	.	.
Template Conservation																																												.	.	.
Template Sequence		D	S	N	G	T	P	H	Q	A	F	V	R	S	K	G	E	V	I	V	S	A	G	T	I	G	T	P	Q	L	L	L	L	S	G	V	G	P	E	S	Y	L	S	.	.	.	S	L	N	I	P	V	V	L	S	H	P	Y	V	G	Q	C	L	V
Template Known Secondary structure			T	T	S																													T	T									.	.	.		T	T				S				T	T	T	T				B
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions