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Job DescriptionP33940
Confidence99.94%DateThu Jan 5 11:52:57 GMT 2012
Rank13Aligned Residues355
% Identity15%Templatec3nyeA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-arginine dehydrogenase; PDBTitle: crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase2 in complex with imino-arginine
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90.........100..
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Query Sequence  KAKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISI
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Template Sequence  HHHHHHPIEADYLVIGAGIAGASTGYWLSA. . HGRVVVLERE. AQPGYHSTG. . RSAAHYTVAYGTPQV. . . . . . . . . . .
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STT..TS

SS.SSTTSSGGG..SS


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   995....1000.........1010.........1020.... .....1030.... .....1040... ......1050........
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  EKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKEWA
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Template Sequence  . . . . . . . . . . RALTAASRAFFDNPPAGFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQM. . . RLLDAEQACSIV
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   10591060.........1070.........1080.........1090.........1100.........1110... ......1120.....
 
   183......190.........200.........210.........220.........230.........240.........250.........260..
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Query Sequence  PLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAK
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Template Sequence  PV. . . . LRRDKVFGATYDPTGADIDTDALHQGYLRGIRRN. QGQVLCNHEALEIRRVDGAWEVRC. . . . . . . DAGSYRAA
Template Known Secondary structure  TT....B
GGG


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   1126. ..1130.........1140.........1150.........1160. ........1170.........1180..... ....1190...
 
   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  FVFIGAGGAALKLLQESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLDGKRVVLFG
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Template Sequence  VLVNAAGAWCDAIAGLAG. . . VRPLGLQPKRRSAFIFAPPPGIDCHDWPMLVSLDESFYLKPDA. . . GMLLGSPANADPV
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GGGT...








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   1194.....1200.........1210. ........1220.........1230.........1240.........1250.... .....1260.......
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  PFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQRV
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Template Sequence  EAHDVQPEQLDIA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TGMYLIEEATTLTIRRPEHTWAGLRS
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   1268.1270.........1280 .........1290.........1300......
 
   423......430.........440.........450.........460.........470...
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Query Sequence  QIIKRDAEKGGVLRLGTEVVSDQQGTIAALLGASPGASTAAPIMLNLLEKV
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Template Sequence  . . FVADGD. . . . . . LVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALI
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   1307..1310.. .......1320.........1330.........1340.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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