Job Description P33940 Confidence 100.00% Date Thu Jan 5 11:52:57 GMT 2012 Rank 4 Aligned Residues 399 % Identity 13% Template c2r4jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap Resolution 1.96 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	T	D	V	L	L	I	G	G	G	I	M	S	A	T	L	G	T	Y	L	R	E	L	E	P	E	W	S	M	T	M	V	E	R	L	E	G	V	A	Q	E	S	S	N	G	W	N	N	A	G	T	G	H	S	A	L	M	E	L	N	Y	T	P	Q	N	A	D	G	S	I	S	I	E	K	A	V	A	I	N
Query Conservation
Alig confidence																									.	.												.									.	.															.	.	.	.	.	.	.	.
Template Conservation																									.	.												.									.	.															.	.	.	.	.	.	.	.
Template Sequence		E	T	K	D	L	I	V	I	G	G	G	I	N	G	A	G	I	A	A	D	A	A	G	.	.	R	G	L	S	V	L	X	L	E	A	Q	.	D	L	A	C	A	T	S	S	.	.	A	S	S	K	L	I	H	G	G	L	R	Y	L	E	.	.	.	.	.	.	.	.	H	Y	E	F	R	L	V	S	E	A	L
Template Known Secondary structure												S												T	.	.	T	T								S	S	.	S	T	T		S	G	G	G	.	.	S	S								G	G	G	G	G	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure																									.	.												.									.	.															.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.									.	.	60	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	F	Q	I	S	R	Q	F	W	A	H	Q	V	E	R	G	V	L	R	T	P	R	S	F	I	N	T	V	P	H	M	S	F	V	W	G	E	D	N	V	N	F	L	R	A	R	Y	A	A	L	Q	Q	S	S	L	F	R	G	M	R	Y	S	E	D	H	A	Q	I	K	E	W	A	P	L	V	M	E	G	R
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.																																						.	.																	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.																																						.	.																	.	.	.	.
Template Sequence		A	E	R	E	V	L	L	K	X	.	.	.	.	.	.	.	.	.	.	.	.	A	P	H	I	A	F	P	X	R	F	R	L	P	H	R	P	H	L	R	P	A	W	M	I	R	I	G	L	F	M	Y	D	H	L	G	K	R	.	.	T	S	L	P	G	S	T	G	L	R	F	G	A	N	S	V	.	.	.	.
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.		T	T	T												T	T	T	S															S	S			.	.	S	S	S										T	T	S	S	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																																						.	.																	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.													.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	Q	Q	K	V	A	A	T	R	T	E	I	G	T	D	V	N	Y	G	E	I	T	R	Q	L	I	A	S	L	Q	K	K	S	N	F	S	L	Q	L	S	S	E	V	R	A	L	K	R	N	D	D	N	T	W	T	V	T	V	A	D	L	K	N	G	T	A	Q	N	I	R	A	K	F	V	F	I	G	A	G
Query Conservation
Alig confidence		.																																	.																				.
Template Conservation		.																																	.																				.
Template Sequence		.	L	K	P	E	I	K	R	G	F	E	Y	S	D	C	W	V	D	D	A	R	L	V	L	A	N	A	Q	X	V	V	R	K	.	G	G	E	V	L	T	R	T	R	A	T	S	A	R	R	E	N	G	L	.	W	I	V	E	A	E	D	I	D	T	G	K	K	Y	S	W	Q	A	R	G	L	V	N	A	T	G
Template Known Secondary structure		.	B		T	T																												T	.	T						S										T	T		.								T	T	T																G
Template Predicted Secondary structure		.																																	.																				.
Template SS confidence
			131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	L	K	L	L	Q	E	S	G	I	P	E	A	K	D	Y	A	G	F	P	V	G	G	Q	F	L	V	S	E	N	P	D	V	V	N	H	H	L	A	K	V	Y	G	K	A	S	V	G	A	P	P	M	S	V	P	H	I	D	T	R	V	L	D	G	K	R	V	V	L	F	G	P	F	A	T	F	S	T
Query Conservation
Alig confidence														.																					.	.	.																																										.	.	.
Template Conservation														.																					.	.	.																																										.	.	.
Template Sequence		P	W	V	K	Q	F	F	D	D	G	X	H	.	L	P	S	P	Y	G	I	R	L	I	K	G	S	H	I	V	V	P	R	V	.	.	.	H	T	Q	K	Q	A	Y	I	L	Q	N	E	D	K	R	I	V	F	V	I	P	W	X	D	E	F	S	I	I	G	T	T	D	V	E	Y	K	G	D	P	K	.	.	.
Template Known Secondary structure		G	G								T	T		.				S	S															S	.	.	.		S		S								T	T	S									T	T	T													S		G	G	.	.	.
Template Predicted Secondary structure														.																					.	.	.																																										.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		K	F	L	K	N	G	S	L	W	D	L	M	S	S	T	T	T	S	N	V	M	P	M	M	H	V	G	L	D	N	F	D	L	V	K	Y	L	V	S	Q	V	M	L	S	E	E	D	R	F	E	A	L	K	E	Y	Y	P	Q	.	A	K	K	E	D	W	R	L	W	Q	A	G	Q	R	V	Q	I	I	K	R	D
Query Conservation																																																												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	A	V	K	I	E	E	S	E	I	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	N	V	Y	N	T	H	F	K	K	Q	L	S	R	D	D	I	V	W	T	Y	S	G	V	R	P	L	C	D	D	E	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	G											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	B	S	S				G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													281	.	.	.	.	.	.	.	.	290	.																										.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.					.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		A	E	K	G	G	V	L	R	L	G	T	E	V	V	S	D	Q	Q	G	.	.	.	.	T	I	A	A	L	L	G	A	S	P	G	A	S	T	A	A	P	I	M	L	N	L	L	E	K	V	F	G	D	R	V	S	S	P	Q	W	Q	A	T	L	K	A	I	V	P	S	Y	G	R	K	L	N	G	D	V	A	A
Query Conservation																					.	.	.	.
Alig confidence								.	.												.	.	.	.										.	.																															.	.	.
Template Conservation								.	.																									.	.																															.	.	.
Template Sequence		D	S	P	Q	A	I	.	.	T	R	D	Y	T	L	D	I	H	D	E	N	G	K	A	P	L	L	S	V	F	G	G	K	.	.	L	T	T	Y	R	K	L	A	E	H	A	L	E	K	L	T	P	Y	Y	Q	G	I	G	P	A	W	T	K	E	S	.	.	.	V	L	P	G	G	A	I	E	G	D	R	D	D
Template Known Secondary structure		S	S	G	G	G	S	.	.											S	S	S		S										.	.	S	T	T													G	G	G		S	S						G	G	G		.	.	.			T	T				S	S		S
Template Predicted Secondary structure								.	.																									.	.																															.	.	.
Template SS confidence
		325	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.				.	.	.	.	.	390	.	.	.	.	.	.	.
		505	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	R	E	L	Q	Y	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	A	R	L	R	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.