Job Description P33940 Confidence 99.44% Date Thu Jan 5 11:52:57 GMT 2012 Rank 97 Aligned Residues 226 % Identity 12% Template c2jb1B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-amino acid oxidase; PDBTitle: the l-amino acid oxidase from rhodococcus opacus in complex2 with l-alanine Resolution 1.55 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	E	E	Q	E	T	D	V	L	L	I	G	G	G	I	M	S	A	T	L	G	T	Y	L	R	E	L	E	P	E	W	S	M	T	M	V	E	R	L	E	G	V	A	Q	E	S	S	N	G	W	N	N	A	G	T	G	H	S	A	L	M	E	L	N	Y	T	P	Q	N	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.
Template Sequence		G	K	V	K	G	S	H	S	V	V	V	L	G	G	G	P	A	G	L	C	S	A	F	E	L	Q	K	.	.	A	G	Y	K	V	T	V	L	E	A	R	T	R	P	G	G	R	V	W	T	A	R	G	G	S	E	E	T	D	L	S	G	E	T	Q	K	C	T	F	S	E	G	H	F	Y	N	V	G	A	T	R
Template Known Secondary structure						S										S													.	.	T	T								S	S	S	S	S		T	T						T	T						T	T	S									T	T					S	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
																															96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	G	S	I	S	I	E	K	A	V	A	I	N	E	A	F	Q	I	S	R	Q	F	W	A	H	Q	V	E	R	G	V	L	R	T	P	R	S	F	I	N	T	V	P	H	M	S	F	V	W	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		I	P	Q	S	H	I	T	L	D	Y	C	R	E	L	G	V	E	I	Q	G	F	G	N	Q	N	A	N	T	F	V	N	Y	Q	S	D	T	S	L	S	G	Q	S	V	T	Y	R	A	A	K	A	D	T	F	G	Y	M	S	E	L	L	K	K	A	T	D	Q	G	A	L	D	Q	V	L	.	.	.	.	.	.	S
Template Known Secondary structure				T	T											T											T	T	S							S	S	T	T	T	T																										T	T	T	T	T	T	T		.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																							170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	N	V	N	F	L	R	A	R	Y	A	A	L	Q	Q	S	S	L	F	R	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	S	E	D	H	A	Q	I	K	E	W	A	P	L	V	M	E	G	R	D	P	Q	Q	K	V	A	A	T	R	T	E	I	G	T
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	D	K	D	A	L	S	E	F	L	S	D	F	G	D	L	S	D	D	G	R	Y	L	G	S	S	R	R	G	Y	D	S	E	P	G	A	G	L	N	F	G	T	E	K	K	P	F	A	M	Q	E	V	I	R	S	G	I	G	R	N	F	S	F	D	F	G	Y	D	Q	A	M	M	M	F	T	P	V	G	G
Template Known Secondary structure																	T			T	T	S						G	G	G								S	T	T																		T	T	T	T	T	G	G	G	G	G		T	T	T	S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	N	Y	G	E	I	T	R	Q	L	I	A	S	L	Q	K	K	S	N	F	S	L	Q	L	S	S	E	V	R	A	L	K	R	N	D	D	N	T	W	T	V	T	V	A	D	L	K	N	G	T	A	Q	N	I	R	A	K	F	V	F	I	G	A
Query Conservation
Alig confidence		.	.	.															.	.	.																											.	.	.
Template Conservation		.	.	.															.	.	.																											.	.	.
Template Sequence		.	.	.	M	D	R	I	Y	Y	A	F	Q	D	R	I	G	T	.	.	.	D	N	I	V	F	G	A	E	V	T	S	M	K	N	V	S	E	G	V	T	V	E	Y	T	A	G	.	.	.	G	S	K	K	S	I	T	A	D	Y	A	I	C	T	I
Template Known Secondary structure		.	.	.	T	T												G	.	.	.	G	G			S	S										T	T									T	.	.	.	T								S						S
Template Predicted Secondary structure		.	.	.															.	.	.																											.	.	.
Template SS confidence
					239	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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