Job Description P33940 Confidence 99.97% Date Thu Jan 5 11:52:57 GMT 2012 Rank 7 Aligned Residues 364 % Identity 14% Template c2gahB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:heterotetrameric sarcosine oxidase beta-subunit; PDBTitle: heterotetrameric sarcosine: structure of a diflavin2 metaloenzyme at 1.85 a resolution Resolution 2.00 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	A	A	K	A	K	A	S	E	E	Q	E	T	D	V	L	L	I	G	G	G	I	M	S	A	T	L	G	T	Y	L	R	E	L	E	P	E	W	S	M	T	M	V	E	R	L	E	G	V	A	Q	E	S	S	N	G	W	N	N	A	G	T	G	H	S	A	L	M	E	L	N	Y	T	P	Q	N	A	D	G
Query Conservation
Alig confidence																																																.										.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.										.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	F	L	W	A	N	P	E	P	K	K	S	Y	D	A	I	I	V	G	G	G	G	H	G	L	A	T	A	Y	F	L	A	K	N	H	G	I	T	N	V	A	V	L	E	K	.	G	W	L	A	G	G	N	X	A	.	.	R	N	T	T	I	I	R	S	N	Y	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S										S										S																								S	.	S	S	T	T		S	G	G	G	.	.	T	S				B					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.										.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	S	I	E	K	A	V	A	I	N	E	A	F	Q	I	S	R	Q	F	W	A	H	Q	V	E	R	G	V	L	R	T	P	R	S	F	I	N	T	V	P	H	M	S	F	V	W	G	E	D	N	V	N	F	L	R	A	R	Y	A	A	L	Q	Q	S	S	L	F	R	G	M	R	Y	S	E	D	H	A	Q	I
Query Conservation
Alig confidence		.	.	.	.	.																										.	.	.																																					.	.	.
Template Conservation		.	.	.	.	.																										.	.	.																																					.	.	.
Template Sequence		.	.	.	.	.	L	W	D	E	S	A	G	I	Y	E	K	S	L	K	L	W	E	Q	L	P	E	D	L	E	Y	.	.	.	D	F	L	F	S	Q	R	G	V	L	N	L	A	H	T	L	G	D	V	R	E	S	V	R	R	V	E	A	N	K	L	N	G	V	D	A	.	.	.	E	W	L	D	P	S	Q	V
Template Known Secondary structure		.	.	.	.	.	S	S																					T	T		.	.	.					B										S																T	T	T				.	.	.
Template Predicted Secondary structure		.	.	.	.	.																										.	.	.																																					.	.	.
Template SS confidence
							74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.
		179	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		K	E	W	A	P	L	V	M	E	G	R	D	.	P	Q	Q	K	V	A	A	T	R	T	E	I	G	T	D	V	N	Y	G	E	I	T	R	Q	L	I	A	S	L	Q	K	K	S	N	F	S	L	Q	L	S	S	E	V	R	A	L	K	R	N	D	D	N	T	W	T	V	T	V	A	D	L	K	N	G	T	A	Q
Query Conservation														.
Alig confidence														.																																	.																										.	.	.	.	.	.
Template Conservation																																															.																										.	.	.	.	.	.
Template Sequence		K	E	A	C	P	I	I	N	T	S	D	D	I	R	Y	P	V	X	G	A	T	W	Q	P	R	A	G	I	A	K	H	D	H	V	A	W	A	F	A	R	K	A	N	E	X	.	G	V	D	I	I	Q	N	C	E	V	T	G	F	I	K	D	G	E	K	V	T	G	V	K	T	.	.	.	.	.	.	T	R	G
Template Known Secondary structure						T	T	S			S	S		S	S	S									T	T		B	B																	T	.	T						S									S	S	S	B							.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																															.																										.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	R	A	K	F	V	F	I	G	A	G	G	A	A	L	K	L	L	Q	E	S	G	I	P	E	A	K	D	Y	A	G	F	P	V	G	G	Q	F	L	V	S	E	N	P	D	V	V	N	H	H	L	A	K	V	Y	G	K	A	S	V	G	A	P	P	M	S	V	P	H	I	D	T	R	V	L	D	G	K	R
Query Conservation
Alig confidence																										.	.	.	.																.	.	.	.	.
Template Conservation																										.	.	.	.																.	.	.	.	.
Template Sequence		T	I	H	A	G	K	V	A	L	A	G	A	G	H	S	S	V	L	A	E	X	A	G	F	.	.	.	.	E	L	P	I	Q	S	H	P	L	Q	A	L	V	S	E	.	.	.	.	.	L	F	E	P	V	H	P	T	V	V	X	S	N	H	I	H	V	Y	V	S	Q	A	H	K	G	E	L	V	X	G	A	G
Template Known Secondary structure													G	G	G									T		.	.	.	.																.	.	.	.	.			S	S				S					T	T	T	T							T	T	S
Template Predicted Secondary structure																										.	.	.	.																.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	L	F	G	P	F	A	T	F	S	T	K	F	L	K	N	G	S	L	W	D	L	M	S	S	T	T	T	S	N	V	M	P	M	M	H	V	G	L	D	N	F	D	L	V	K	Y	L	V	S	Q	V	M	L	S	E	E	D	R	F	E	A	L	K	E	Y	Y	P	Q	A	K	K	E	D	W	R	L	W	Q
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	Y	N	G	Y	G	Q	R	G	A	F	H	V	I	Q	E	Q	X	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	E	L	F	P	I	F	A	R	A	H	V	L	R	T	W
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S				S	S				T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287																	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.																										.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Q	R	V	Q	I	I	K	R	D	A	E	K	G	G	V	L	R	L	G	T	E	V	V	S	D	Q	Q	G	T	I	A	A	L	L	G	A	S	P	G	A	S	T	A	A	P	I	M	L	N	L	L	E	K	V	F
Query Conservation
Alig confidence							.	.	.	.	.	.														.	.	.
Template Conservation							.	.	.	.	.	.														.	.	.
Template Sequence		G	G	I	V	D	.	.	.	.	.	.	T	T	X	D	A	S	P	I	I	S	K	T	P	.	.	.	I	Q	N	L	Y	V	N	C	G	W	G	T	G	G	F	K	G	T	P	G	A	G	F	T	L	A	H	T	I	A
Template Known Secondary structure							.	.	.	.	.	.			T	T	S								S	.	.	.	S	B	T							B	T	T			S	T	T
Template Predicted Secondary structure							.	.	.	.	.	.														.	.	.
Template SS confidence
		326	.	.	.	330							.	.	.	.	.	.	.	.	.	340	.	.	.				.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.