 |
Job Description | P33940 | Confidence | 86.06% | Date | Thu Jan 5 11:52:57 GMT 2012 |
Rank | 458 | Aligned Residues | 33 |
% Identity | 15% | Template | c2d4aC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:malate dehydrogenase; |
PDBTitle: structure of the malate dehydrogenase from aeropyrum pernix
|
Resolution | 2.87 Å |
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | L | I | G | G | G | I | M | S | A | T | L | G | T | Y | L | R | E | L | E | P | E | W | S | M | T | M | V | E | R | L | E | G |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   | . |   |
|
|   |
|   |
|   |   |   |   |
Template Sequence |   |
I | T | I | L | G | A | G | K | V | G | M | A | T | A | V | M | L | M | M | R | G | Y | . |
D | D | L | L | L | I | A | R | T | P | G |
Template Known Secondary structure |   |
 |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | S |
|  |  |  |  |
| S | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|