Job Description P33940 Confidence 99.38% Date Thu Jan 5 11:52:57 GMT 2012 Rank 117 Aligned Residues 231 % Identity 12% Template c2cfyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin reductase 1; PDBTitle: crystal structure of human thioredoxin reductase 1 Resolution 2.7 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	D	V	L	L	I	G	G	G	I	M	S	A	T	L	G	T	Y	L	R	E	L	E	P	E	W	S	M	T	M	V	E	R	L	E	G	V	A	Q	E	S	S	N	G	W	N	N	A	G	T	G	H	S	A	L	M	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																					.	.
Template Sequence		D	Y	D	L	I	I	I	G	G	G	S	G	G	L	A	A	A	K	E	A	A	Q	.	.	Y	G	K	K	V	M	V	L	D	F	V	T	P	T	P	L	G	T	R	W	.	.	G	L	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M	H	Q	A	A	L	L	G	Q	A	L	Q	D	S	R	N	Y	G
Template Known Secondary structure		S									S												T	.	.	T	T													T	T					.	.		T	T							S																							T	T
Template Predicted Secondary structure																								.	.																					.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	N	Y	T	P	Q	N	A	D	G	S	I	S	I	E	K	A	V	A	I	N	E	A	F	Q	I	S	R	Q	F	W	A	H	Q	V	E	R	G	V	L	R	T	P	R	S	F	I	N	T	V	P	H	M	S	F	V	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	K	V	E	E	T	V	K	H	D	W	D	R	M	I	E	A	V	Q	N	H	I	G	S	L	N	W	G	Y	R	V	A	L	R	E	K	K	V	V	Y	E	N	A	Y	G	Q	F	I	G	P	H	R	I	K	A	T	N	N	K	G	K	E	K	I	Y	S	A	E	R	F	L	I	A	T	G	E	R	P	R	Y
Template Known Secondary structure						S	S																														T	T													T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
					147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	D	N	V	N	F	L	R	A	R	Y	A	A	L	Q	Q	S	S	L	F	R	G	M	R	Y	S	E	D	H	A	Q	I	K	E	W	A	P	L	V	M	E	G	R	D	P	Q	Q	K	V	A	A	T	R	T	E	I	G	T	D	V	N	Y	G	E	I	T	R	Q	L	I	A	S	L	Q	K	K	S
Query Conservation		.	.	.
Alig confidence		.	.	.																																										.	.	.																																	.
Template Conservation																																														.	.	.																																	.
Template Sequence		L	G	I	P	G	D	K	E	Y	C	I	S	S	D	D	L	F	S	L	P	Y	C	P	G	K	T	L	V	V	G	A	S	Y	V	A	L	E	C	A	G	F	L	A	G	.	.	.	I	G	L	D	V	T	V	M	V	R	S	I	L	L	R	G	F	D	Q	D	M	A	N	K	I	G	E	H	M	E	E	H	.
Template Known Secondary structure			S	S	T	T						B						T	T		S	S				S							S													.	.	.	T	T								S	S		S	S	T	T	S															T	.
Template Predicted Secondary structure																																														.	.	.																																	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		N	F	S	L	Q	L	S	S	E	V	R	A	L	K	R	N	D	D	N	.	.	.	T	W	T	V	T	V	A	D	L	K	N	G	T	A	Q	N	I	R	A	K	F	V	F	I	G	A	G
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		G	I	K	F	I	R	Q	F	V	P	I	K	V	E	Q	I	E	A	G	T	P	G	R	L	R	V	V	A	Q	S	T	N	S	E	E	I	I	E	G	E	Y	N	T	V	M	L	A	I	G
Template Known Secondary structure		T						S												S	T	T										S	S	S	S								S						S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions