 |
Job Description | P33940 | Confidence | 99.13% | Date | Thu Jan 5 11:52:57 GMT 2012 |
Rank | 177 | Aligned Residues | 224 |
% Identity | 13% | Template | c2bcpA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:nadh oxidase; |
PDBTitle: structural analysis of streptococcus pyogenes nadh oxidase:2 c44s nox with azide
|
Resolution | 2.10 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | S | M | A | A | K | A | K | A | S | E | E | Q | E | T | . |
. |
. |
D | V | L | L | I | G | G | G | I | M | S | A | T | L | G | T | Y | L | R | E | L | . |
E | P | E | W | S | M | T | M | V | E | R | L | E | G | V | A | Q | E | S | S | N | G | W | N | N | A | G | T | G | H | S | A | L | M | E | L | N | Y | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|
|
|   | . |   |
|
|   |   |
|   |
|
|
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |
|
|
|   |
|
|   |
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
G | Q | Q | M | G | R | T | L | Y | D | D | D | D | K | D | R | W | G | S | K | I | V | V | V | G | A | N | H | A | G | T | A | C | I | K | T | M | L | T | N | Y | G | D | A | N | E | I | V | V | F | D | Q | N | S | N | I | S | F | L | G | S | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
|
|
|
|
|
| S |
|
|
|
|
| S | S |
|
|
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |  |  |  |  |  |
| S | S | S |
|
|
| B |
| T | T |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|