Job Description P33940 Confidence 99.39% Date Thu Jan 5 11:52:57 GMT 2012 Rank 114 Aligned Residues 205 % Identity 11% Template c1v0jB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:udp-galactopyranose mutase; PDBTitle: udp-galactopyranose mutase from mycobacterium tuberculosis Resolution 2.25 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.																			.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.																			.	.	.	.	.	.	.
Query Sequence		E	Q	E	T	D	V	L	L	I	G	G	G	I	M	S	A	T	L	G	T	Y	L	R	E	L	E	P	E	W	S	M	T	M	V	E	R	L	E	G	V	A	Q	E	S	S	N	G	W	N	N	A	G	.	.	.	T	G	H	S	A	L	M	E	L	N	Y	T	P	Q	N	A	D	G	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.																			.	.	.	.	.	.	.
Alig confidence																											.																											.	.	.																			.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		T	A	R	F	D	L	F	V	V	G	S	G	F	F	G	L	T	I	A	E	R	V	A	T	Q	.	L	D	K	R	V	L	V	L	E	R	R	P	H	I	G	G	N	A	Y	S	E	A	E	P	Q	T	G	I	E	V	H	K	Y	G	A	H	L	F	H	T	S	N	K	R	V	W	D	Y	V	R	Q	F	T	D
Template Known Secondary structure				S		S							S														.										S	S	S	S	S	S	G	G	G						T	T	T						T	T	S							S									T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
																								99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	S	I	E	K	A	V	A	I	N	E	A	F	Q	I	S	R	Q	F	W	A	H	Q	V	E	R	G	V	L	R	T	P	R	S	F	I	N	T	V	P	H	M	S	F	V	W	G	E	D	N	V	N	F	L	R	A	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.
Template Sequence		F	T	D	Y	R	H	R	V	F	A	M	H	N	G	Q	A	Y	Q	F	P	M	G	L	G	L	V	S	Q	F	F	G	K	Y	F	T	P	E	Q	A	R	Q	L	I	A	E	Q	A	A	E	I	D	T	A	D	E	E	K	A	I	S	L	I	G	.	.	.	.	.	.	R	P	L	Y	E	A	F	V	K	G	Y
Template Known Secondary structure		B												T	T						S	S	S									T	S															G	G	G	S		S					T	T						.	.	.	.	.	.								T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	A	L	Q	Q	S	S	L	F	R	G	M	R	Y	S	E	D	H	A	Q	I	K	E	W	A	P	L	V	M	E	G	R	D	P	Q	Q	K	V	A	A	T	R	T	E	I	G	T	D	V	N	Y	G	E	I	T	R	Q	L	I	A	S	L	Q	K	K	S	N	F	S	L	Q	L	S	S	E	V	R	A	L
Query Conservation
Alig confidence																				.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Sequence		T	A	K	Q	W	Q	T	D	P	K	E	L	P	A	A	N	I	T	.	.	.	.	.	.	R	L	P	V	R	Y	T	F	D	N	R	Y	F	S	D	T	Y	E	G	L	P	T	D	G	.	.	.	.	.	.	.	Y	T	A	W	L	Q	N	M	A	A	D	H	R	I	E	V	R	L	N	T	D	W	F	D	V
Template Known Secondary structure							T	S		G	G	G	S		G	G	G		S	.	.	.	.	.	.						S	S	S				S				S					B	T	T		.	.	.	.	.	.	.									T		S	T	T					S	S
Template Predicted Secondary structure																				.	.	.	.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.								.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	N	D	D	N	T	W	T	V	T	V	A	D	L	K	N	G	T	A	Q	N	I	R	A	K	F	V	F	I	G	A
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	Q	L	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	P	A	A	P	V	V	Y	T	G
Template Known Secondary structure						G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	T	T							S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.																.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions