Job Description P33940 Confidence 99.79% Date Thu Jan 5 11:52:57 GMT 2012 Rank 29 Aligned Residues 266 % Identity 13% Template c1gpeA_ PDB info PDB header:oxidoreductase(flavoprotein) Chain: A: PDB Molecule:protein (glucose oxidase); PDBTitle: glucose oxidase from penicillium amagasakiense Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	S	M	A	A	K	A	K	A	S	E	E	Q	E	T	D	V	L	L	I	G	G	G	I	M	S	A	T	L	G	T	Y	L	R	E	L	E	P	E	W	S	M	T	M	V	E	R	L	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	Q	E	S	S	N	G	W	N	N	A	G	T
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		Q	S	S	L	L	S	D	P	S	K	V	A	G	K	T	Y	D	Y	I	I	A	G	G	G	L	T	G	L	T	V	A	A	K	L	T	E	.	N	P	K	I	K	V	L	V	I	E	K	G	F	Y	E	S	N	D	G	A	I	I	E	D	P	N	A	Y	G	Q	I	F	G	T	T	V	D	Q	N	Y	L	T	V
Template Known Secondary structure		G	G	G	S	B			G	G	G	T	T	T											S												T	.	S	T	T								S	S				T	T	S							G	G	G	T	T	T	T	T	T	S	T	T	B
Template Predicted Secondary structure																																						.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	S	A	L	M	E	L	N	Y	T	P	Q	N	A	D	G	S	I	S	I	E	K	A	V	A	I	N	E	A	F	Q	I	S	R	Q	F	W	A	H	Q	V	E	R	G	V	L	R	T	P	R	S	F	I	N	T	V	P	H	M	S	F	V	W	G	E	D	N	V	N	F	L	R	A	R	Y	A	A	L	Q
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	I	N	N	R	T	N	N	I	K	A	G	K	G	L	G	G	S	T	L	I	N	G	D	S	W	T	R	P	D	K	V	Q	I	D	S	W	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	G	M	E	G	W	N	W	D	N	M	F	E	Y	M	K	K	A	E
Template Known Secondary structure				T	T	S								B		S	T	T	G	G	G	G	T	S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			T	T		S											T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
																																				162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	S	L	F	R	G	M	R	Y	S	E	D	H	A	Q	I	K	E	W	A	P	L	V	M	E	G	R	D	P	Q	Q	K	V	A	A	T	R	T	E	I	G	T	D	V	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	R	T	P	T	A	A	Q	L	A	A	G	H	S	F	N	A	T	C	H	G	T	N	G	T	V	Q	S	G	A	R	D	N	G	Q	P	W	S	P	I	M	K	A	L	M	N	T	V	S	A	L	G	V	P	V	Q	Q	D	F	L	C	G	H	P	R	G	V	S	M	I	M	N	N	L	D	E	N	Q	V
Template Known Secondary structure														T					G	G	G			B	S	S	S				B					S	S		B		T												T	T			B	S			T	T	S	S											S	B		T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																				.	.	.	.																														.
Query SS confidence																																				.	.	.	.																														.
Query Sequence		Y	G	E	I	T	R	Q	L	I	A	S	L	Q	K	K	S	N	F	S	L	Q	L	S	S	E	V	R	A	L	K	R	N	D	D	.	.	.	.	N	T	W	T	V	T	V	A	D	L	K	N	G	T	A	Q	N	I	R	A	K	F	V	F	I	G	A	G	G	.	A	A	L	K	L	L	Q	E	S	G	I	P
Query Conservation																																				.	.	.	.																														.
Alig confidence																																				.	.	.	.																														.
Template Conservation
Template Sequence		R	V	D	A	A	R	A	W	L	L	P	N	Y	Q	R	S	N	L	E	I	L	T	G	Q	M	V	G	K	V	L	F	K	Q	T	A	S	G	P	Q	A	V	G	V	N	F	G	T	N	K	A	V	N	F	D	V	F	A	K	H	E	V	L	L	A	A	G	S	A	I	S	P	L	I	L	E	Y	S	G	I	G
Template Known Secondary structure		B								T	T	T	T	T	T		T	T						S												T	T													T	T															S		T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		283																		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	D	Y	A	G	F	P	V	G	G	Q	F	L	V	S	E	N	P	D
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	S	V	L	D	Q	A	N	V	T	Q	L	L	D	L	P	V	G	I	N	M	Q	D	Q	T	T	T	T	V	S	S	R	A	S	S	A	G
Template Known Secondary structure									T	T				S					T	T		S	B	B													G	G	G
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions