Return to main results Retrieve Phyre Job Id

Job DescriptionP58033
Confidence6.46%DateThu Jan 5 12:06:31 GMT 2012
Rank18Aligned Residues10
% Identity50%Templatec1s1hL_
PDB info PDB header:ribosomeChain: L: PDB Molecule:40s ribosomal protein s23; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.
Resolution11.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........
Predicted Secondary structure 








Query SS confidence 









Query Sequence  GRDVPDITGV
Query Conservation 

 
 

 

Alig confidence 









Template Conservation   

  




Template Sequence  GKAKGDIPGV
Template Known Secondary structure 

BTTTBTT
Template Predicted Secondary structure 









Template SS confidence 









   111........120
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions