|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | L | K | R | V | A | E | A | K | L | P | T | P | W | G | D | F | L | M | V | G | F | E | E | L | A | T | G | H | D | H | V | A | L | V | Y | G | D | I | S | G | H | T | P | V | L | A | R | V | H | S | E | C | L | T | G | D | A | L | F | S | L | R | C | D | C | G | F | Q | L | E | A | A | L | T | Q | I | A | E |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
X | Q | L | K | R | V | A | E | A | K | L | P | T | P | W | G | D | F | L | X | V | G | F | E | E | L | A | T | G | H | D | H | V | A | L | V | Y | G | D | I | S | G | H | T | P | V | L | A | R | V | H | S | E | C | L | T | G | D | A | L | F | S | L | R | C | D | C | G | F | Q | L | E | A | A | L | T | Q | I | A | E |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  | S |
|
|
| S | S | S |
|  |  |  |  |  |  |  |
|
|  |  |  |  | T | S |
|
| S | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | R | G | I | L | L | Y | H | R | Q | E | G | R | N | I | G | L | L | N | K | I | R | A | Y | A | L | Q | D | Q | G | Y | D | T | V | E | A | N | H | Q | L | G | F | A | A | D | E | R | D | F | T | L | C | A | D | M | F | K | L | L | G | V | N | E | V | R | L | L | T | N | N | P | K | K | V | E | I | L | T | E |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |
|
|   |   |
|   |
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |
|
|
|   |   |   |
|
|
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|
|   |   |   |
|   |
|
|
|   |   |   |
|
|
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |
Template Sequence |   |
E | G | R | G | I | L | L | Y | H | R | Q | E | G | R | N | I | G | L | L | N | K | I | R | A | Y | A | L | Q | D | Q | G | Y | D | T | V | E | A | N | H | Q | L | G | F | A | A | D | E | R | D | F | T | L | C | A | D | X | F | K | L | L | G | V | N | E | V | R | L | L | T | N | N | P | K | K | V | E | I | L | T | E |
Template Known Secondary structure |   |
 | T | S |  |  |  |  |  |  |
|
|  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | T | T |
|
| S |
|
|
|
| T |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | I | N | I | V | E | R | V | P | L | I | V |
Query Conservation |   |
  |
|
|   |
|   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|   |
|
|
|   |
|
Template Sequence |   |
A | G | I | N | I | V | E | R | V | P | L | I | V |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |