 |
Job Description | P0A7I7 | Confidence | 11.86% | Date | Thu Jan 5 11:05:44 GMT 2012 |
Rank | 72 | Aligned Residues | 95 |
% Identity | 16% | Template | c3q3vA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:phosphoglycerate kinase; |
PDBTitle: crystal structure of phosphoglycerate kinase from campylobacter2 jejuni.
|
Resolution | 2.15 Å |
|
 |
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | H | T | P | V | L | A | R | V | H | S | E | C | L | T | G | D | A | L | F | S | L | R | C | D | C | G | . |
F | Q | L | E | A | A | L | T | Q | I | A | E | E | G | R | G | I | L | L | Y | H | R | Q | E | G | R | N | I | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | N | K | I | R | A | Y | A | L | Q | D | Q | G |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|   | . |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |
|
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |   | . |   |
|   |
|   |
|
|   |
|
|   |
|   |
|
|
|
|   |   |
|   |   |   |
| . |
|
|
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
| . | . | . | . | . |
Template Sequence |   |
A | K | K | K | V | F | I | R | C | D | F | N | V | P | Q | D | D | . |
F | L | N | I | T | D | D | R | R | I | R | S | A | I | P | T | I | R | Y | C | L | D | N | G | . |
C | S | V | I | L | A | S | H | L | G | R | P | K | E | I | S | S | K | Y | S | L | E | P | V | A | K | R | L | A | R | L | L | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
|
|
|
|
|
| B |
| T | . | T |
|
| B | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
|  |  |  |  |  |
|
|
| S |
|
| S | S |
|
| G | G | G |
| S |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |
|
| . |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
|
|
|
  |
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | D | T | V | E | A | N | H | Q | L | G | F | A | A | D | E | R | D | F | T | L | C | A | D | M | F | K | L | L | G | V | N | E | V | R | L | L | T | N |
Query Conservation |   |
  |
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |
|
|
|   |   |   |
|
|
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |   |   |   |
|   |   |
|   |
|   |   | . |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
D | K | E | I | V | X | A | K | D | V | I | . |
G | E | D | A | K | T | K | A | X | N | L | K | A | G | E | I | L | L | L | E | N |
Template Known Secondary structure |   |
. | . | . | . | . | . | T | S |
|
|  |  |
| S | S | S | S | . | S |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |
| S |
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|
|
|  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
86 | . | . | . | 90 | . | . | . | . | . | . | |
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|