Job Description P13458 Confidence 99.86% Date Thu Jan 5 11:33:35 GMT 2012 Rank 5 Aligned Residues 179 % Identity 21% Template c3qkuB_ PDB info PDB header:replication Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: mre11 rad50 binding domain in complex with rad50 and amp-pnp Resolution 3.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	L	S	L	R	L	K	N	L	N	S	L	K	G	E	W	K	I	D	F	T	R	E	P	F	A	S	N	G	L	F	A	I	T	G	P	T	G	A	G	K	T	T	L	L	D	A	I	C	L	A	L	Y	H	E	T	P	R	L	S	N	V	S	Q	S	Q	N	D	L	M	T	R	D	T	A	E	C	L
Query Conservation
Alig confidence																		.						.	.	.	.	.	.																																							.	.	.
Template Conservation																		.						.	.	.	.	.	.																																							.	.	.
Template Sequence		M	K	L	E	R	V	T	V	K	N	F	R	S	H	S	D	.	T	V	V	E	F	.	.	.	.	.	.	K	E	G	I	N	L	I	I	G	Q	N	G	S	G	K	S	S	L	L	D	A	I	L	V	G	L	Y	W	P	L	R	I	K	D	I	K	K	D	.	.	.	E	F	T	K	V	G	A	R	D	T	Y
Template Known Secondary structure													T	T				.						.	.	.	.	.	.		S									T	T	S	S														S	S				T	T			T	T	.	.	.	T	T	B		T	T
Template Predicted Secondary structure																		.						.	.	.	.	.	.																																							.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.							.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	E	F	E	V	K	G	E	A	Y	R	A	F	W	S	Q	N	R	A	R	N	Q	P	D	G	N	L	Q	V	P	R	V	E	L	A	R	C	A	D	G	K	I	L	A	D	K	V	K	D	K	L	E	L	T	A	T	L	T	G	L	D	Y	G	R	F	T	R	S	M	L	L	S	Q	G	Q	F	A	A
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		I	D	L	I	F	E	K	D	G	T	K	Y	R	I	T	R	R	F	L	K	.	.	.	.	.	G	Y	S	S	G	E	I	H	A	M	K	R	L	V	G	N	E	W	K	H	V	T	E	P	S	S	K	A	I	S	A	F	M	E	K	L	I	P	Y	N	I	F	L	N	A	I	Y	I	R	Q	G	Q	I	D	A
Template Known Secondary structure									S	S											T	.	.	.	.	.	T		S	S											T	T						S		S	S												S								T	T				T	T		S	S	T
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	N	A	K	P	K	E	R	A	E	L	L	E	E	L	T	G	T	E	I	Y	G	Q	I	S	A	M	V	F	E	Q	H	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	E	S	D	E	A	R	E	K	V	V	R	E	V	L	A	A	L	S	K	I	G	E	L	A	S	E	I	F	A	E	F	T
Template Known Secondary structure		T	S	S															T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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