Job Description P13458 Confidence 99.90% Date Thu Jan 5 11:33:35 GMT 2012 Rank 4 Aligned Residues 232 % Identity 22% Template c3auyB_ PDB info PDB header:recombination Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: crystal structure of rad50 bound to adp Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	L	S	L	R	L	K	N	L	N	S	L	K	G	E	W	K	I	D	F	T	R	E	P	F	A	S	N	G	L	F	A	I	T	G	P	T	G	A	G	K	T	T	L	L	D	A	I	C	L	A	L	Y	H	E	T	P	R	L	S	N	V	S	Q	S	Q	N	D	L	M	T	R	D	T	A	E	C	L
Query Conservation
Alig confidence																.								.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation																.								.	.	.	.	.	.																																				.	.	.	.	.	.
Template Sequence		M	I	L	K	E	I	R	M	N	N	F	K	S	H	.	V	N	S	R	I	K	F	.	.	.	.	.	.	E	K	G	I	V	A	I	I	G	E	N	G	S	G	K	S	S	I	F	E	A	V	F	F	A	L	F	G	A	G	S	F	N	Y	D	.	.	.	.	.	.	T	I	I	T	K	G	K	K	S	V	Y
Template Known Secondary structure													T	T		.								.	.	.	.	.	.		S									T	T	S	S															S					G	G	.	.	.	.	.	.	G	T	B		T	T		S
Template Predicted Secondary structure																.								.	.	.	.	.	.																																				.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	E	F	E	V	K	G	E	A	Y	R	A	F	W	S	Q	N	R	A	R	N	Q	P	D	G	N	L	Q	V	P	R	V	E	L	A	R	C	A	D	G	K	I	L	A	D	K	V	K	D	K	L	E	L	T	A	T	L	T	G	L	D	Y	G	R	F	T	R	S	M	L	L	S	Q	G	Q	F	A	A
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	L	D	F	E	V	N	G	N	N	Y	K	I	I	R	E	Y	D	S	G	R	G	.	.	.	.	.	.	.	.	.	.	.	G	A	K	L	Y	K	N	G	K	P	Y	A	T	T	I	S	A	V	N	K	A	V	N	E	I	L	G	V	D	R	N	M	F	L	N	S	I	Y	I	K	Q	G	E	I	A	K
Template Known Secondary structure									T	T											T	T			.	.	.	.	.	.	.	.	.	.	.							T	T						S														S													T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.												.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	N	A	K	P	K	E	R	A	E	L	L	E	E	L	T	G	T	E	I	Y	G	Q	I	S	A	M	V	F	E	Q	H	K	S	A	R	T	E	L	E	K	L	Q	A	Q	A	S	G	V	T	L	L	T	P	E	Q	V	Q	S	L	T	A	S	L	Q	V	L	T	D	E	E	K	Q	L	I	T	A	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	S	L	K	P	S	E	K	L	E	T	V	A	K	L	L	G	I	D	E	F	E	K	C	Y	Q	K	M	G	E	I	V	K	E	Y	E	K	R	L	E	R	I	E	G	E	L	N	Y	N	L	E	K	E	K	E	K	L	T	K	F	V	E	Y	L	D	K	V	R	R	I	F	G	R	N	G	F	Q	A	Y
Template Known Secondary structure					S														T																																	T	T																				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	Q	Q	S	L	N	W	L	T	R	Q	D	E	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	E	K	Y	V	P	L	I	Q	K	Y	L	N	E	A
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		867	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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