 |
Job Description | P13458 | Confidence | 98.81% | Date | Thu Jan 5 11:33:35 GMT 2012 |
Rank | 26 | Aligned Residues | 80 |
% Identity | 29% | Template | c2nq2C_ |
PDB info |
PDB header:metal transport | Chain: C: PDB Molecule:hypothetical abc transporter atp-binding protein |
PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
|
Resolution | 2.40 Å |
|
 |
  |   |
946 | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | |
. | . | . | . | . | 1010 | . | . | . | . | . | . | . | |
. | . | 1020 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
R | D | T | R | T | L | S | G | G | E | S | F | L | V | S | L | A | L | A | L | A | L | S | D | L | V | S | H | K | T | R | I | D | S | L | F | L | D | E | G | F | G | T | L | D | S | E | T | L | D | T | A | L | D | A | L | D | A | L | . |
N | A | S | G | K | T | I | G | V | I | S | H | V | . |
E | A | M | K | E | R |
Query Conservation |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
| . |   |   |   |   |   |   |
|   |
|
|
|
|   | . |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |
|
|   |
|
|
|   |
|
|   |
|
|   |   | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
R | E | F | T | S | L | S | G | G | Q | R | Q | L | I | L | I | A | R | A | I | A | S | . |
. |
. |
. |
. |
. |
. |
. |
E | C | K | L | I | L | L | D | E | P | T | S | A | L | D | L | A | N | Q | D | I | V | L | S | L | L | I | D | L | A | Q | S | Q | N | M | T | V | V | F | T | T | H | Q | P | N | Q | V | V | A | I |
Template Known Secondary structure |   |
S | B | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | T |
| S |  |  |  |  | S | S | S | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
  |
  |   |
1024 | . | . | . | . | . | 1030 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | V | Q | I | K | V | K | K | I |
Query Conservation |   |
  |   |   |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|   |   |
|
Template Sequence |   |
A | N | K | T | L | L | L | N | K | Q |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
196 | . | . | . | 200 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|