 |
Job Description | P13458 | Confidence | 98.72% | Date | Thu Jan 5 11:33:35 GMT 2012 |
Rank | 43 | Aligned Residues | 80 |
% Identity | 21% | Template | c2d2fA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:sufc protein; |
PDBTitle: crystal structure of atypical cytoplasmic abc-atpase sufc from thermus2 thermophilus hb8
|
Resolution | 1.90 Å |
|
 |
  |   |
946 | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | |
|
Predicted Secondary structure |   |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
R | D | T | R | T | L | S | G | G | E | S | F | L | V | S | L | A | L | A | L | A | L | S | D | L | V | S | H | K | T | R | I | D | S | L | F | L | D | E | G | F | G | T | L | D | S | E | T | L | D | T | A | L | D | A | L | D | A | L | N | A | S | G | K | T | I | G | V | I | S | H | V | E | A | M | K | E | R | . |
. |
Query Conservation |   |
|   |   |   |   |
|
|
|
|
|   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |   |
|
|   |
|   |   |   |
|
|   |
|
|
|
|
|   |   | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | L | N | E | G | F | S | G | G | E | K | K | R | N | E | I | L | Q | L | L | V | L | . |
. |
. |
. |
. |
. |
. |
. |
E | P | T | Y | A | V | L | D | E | T | D | S | G | L | D | I | D | A | L | K | V | V | A | R | G | V | N | A | M | R | G | P | N | F | G | A | L | V | I | T | H | Y | Q | R | I | L | N | Y | I | Q |
Template Known Secondary structure |   |
B | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
| S |  |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| B | T | T | B |  |  |  |  |  |  | S | S | S | G | G | G | G | T | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
  |   |
1024 | . | . | . | . | . | 1030 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | V | Q | I | K | V | K | K | I |
Query Conservation |   |
  |   |   |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|   |   |
|
Template Sequence |   |
P | D | K | V | H | V | M | M | D | G |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
211 | . | . | . | . | . | . | . | . | 220 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|