Return to main results Retrieve Phyre Job Id

Job DescriptionP13458
Confidence93.24%DateThu Jan 5 11:33:35 GMT 2012
Rank438Aligned Residues28
% Identity18%Templatec2c99A_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:psp operon transcriptional activator; PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60
Predicted Secondary structure 











Query SS confidence 



























Query Sequence  FAITGPTGAGKTTLLDAICLALYHETPR
Query Conservation    
 













   
 
    
Alig confidence 



























Template Conservation 


 







 

  

         
Template Sequence  VLIIGERGTGKELIASRLHYLSSRWQGP
Template Known Secondary structure 

TTSSTSTTTTS
Template Predicted Secondary structure 












Template SS confidence 



























   32.......40.........50.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions