Return to main results Retrieve Phyre Job Id

Job DescriptionP13458
Confidence98.48%DateThu Jan 5 11:33:35 GMT 2012
Rank67Aligned Residues81
% Identity22%Templatec1q1bD_
PDB info PDB header:transport proteinChain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   946...950.........960.........970.........980.........990.........1000.... .....1010.........1020....
Predicted Secondary structure 

















.





Query SS confidence 


























































.



















Query Sequence  RDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDAL. NASGKTIGVISHVEAMKERI
Query Conservation 
    




    



 


         
   



 

 

          
  
.      
 



   
    
Alig confidence 





















........




























.



















Template Conservation       




 


 




  ........ 
 








 

      
   
  
    
 


 


   
    
Template Sequence  RKPKALSGGQRQRVAIGRTLVA. . . . . . . . EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTL
Template Known Secondary structure 



GGGTTTSSSSTTTT........

S
BSSTTTT

TTTTT

S
Template Predicted Secondary structure 











........













Template SS confidence 















































































   129130.........140.........150 .........160.........170.........180.........190.........200
 
   1025....1030....
Predicted Secondary structure 



Query SS confidence 









Query Sequence  PVQIKVKKIN
Query Conservation     
 
 
  
Alig confidence 









Template Conservation 



 

  
Template Sequence  ADKIVVLDAG
Template Known Secondary structure 
STT
Template Predicted Secondary structure 



Template SS confidence 









   201........210
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions