|   |
49 | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | H | A | V | L | C | S | Q | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | P | Q | E | F | A | F | E | A | L | M | H | D | A | T | E | A | Y | C | Q | D | I | P | A | P | L | K | R | L | L | P | D | . |
. |
. |
Y | K | R | M | E | E | K | I | D | A | V | I | . |
. |
. |
. |
. |
R | E | K | Y | G | L | P | P | V |
Query Conservation |   |
|
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |
|   |
|   |   |
|   |   | . | . | . |
|   |   |
|
|   |
|
|   |   |
|
| . | . | . | . | . |   |   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|
|
|
|
|
| . | . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
Template Sequence |   |
D | H | L | Q | R | V | N | R | L | A | R | R | L | A | K | D | E | G | A | N | L | N | L | T | L | A | A | A | W | L | H | D | . |
. |
. |
. |
. |
V | I | D | A | H | Q | D | L | I | V | Q | L | N | A | Q | N | V | T | A | D | D | Q | T | A | I | F | A | I | I | D | H | X | S | F | S | K | S | F | N | G | P | Q | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| T | G | G | G | G | G |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
  |   |
111 | . | . | . | |
|
|
. | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
|  |  |  | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
M | S | T | P | . |
. |
. |
V | K | Y | A | D | L | I |
Query Conservation |   |
  |   |   |   | . | . | . |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|
|
|
|
|
|
|
|
Template Sequence |   |
L | S | L | E | G | Q | V | V | Q | D | A | D | R | L |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |