Job Description P76514 Confidence 17.23% Date Thu Jan 5 12:23:54 GMT 2012 Rank 41 Aligned Residues 35 % Identity 23% Template c3skdA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein tthb187; PDBTitle: crystal structure of the thermus thermophilus cas3 hd domain in the2 presence of ni2+ Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																											60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure										.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	A	G	H	L	S	H	.	F	Y	S	V	A	Q	H	A	V	L	C	S	Q	L	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	F	A	F	E	A	L	M	H	D
Query Conservation										.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	W	A	K	S	G	N	P	F	H	P	L	L	A	H	M	L	D	T	A	A	V	A	L	A	V	L	R	M	E	P	P	R	T	R	A	L	Y	A	E	D	W	G	L	P	E	E	G	A	L	A	W	A	A	A	L	V	G	L	H	D
Template Known Secondary structure						B	S	S	S	T	T	S	B																			S													T	S															G	G	G
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions